concept

ALI

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about ALI: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

146Connections
30Hypotheses
0Analyses
0Outgoing
50Incoming
9Experiments
0Debates

Summary

ALI is a concept in neurodegeneration research. Key relationships include: implicated in, regulates, causes. Associated with SEPSIS. Connected to 146 entities in the SciDEX knowledge graph.

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💡 Concept Info
NameALI
Key Genes/ProteinsABCD3, ACTB, AGER, AKT, ALS, AMBRA1

Wiki Pages (1)

Knowledge base pages for this entity

OPALIN — Oligodendrocyte Myelin Membrane Protein

gene · 2228 words

Pathway Diagram

graph TD
    ALI["ALI"]
    S100A9["S100A9"] -->|"activates"| ALI
    SEPSIS["SEPSIS"] -->|"causes"| ALI
    CRH["CRH"] -->|"regulates"| ALI
    MAP1B["MAP1B"] -->|"implicated in"| ALI
    MAP2["MAP2"] -->|"implicated in"| ALI
    MAP6["MAP6"] -->|"implicated in"| ALI
    LIS1["LIS1"] -->|"implicated in"| ALI
    DCX["DCX"] -->|"implicated in"| ALI
    CD2AP["CD2AP"] -->|"implicated in"| ALI
    HCN1["HCN1"] -->|"implicated in"| ALI

Outgoing (0)

TargetRelationTypeStr
No outgoing edges

Incoming (146)

SourceRelationTypeStr
S100A9activatesprotein0.72
SEPSIScausesdisease0.72
CRHregulatesprotein0.64
MMP9associated_withprotein0.60
SF3B1implicated_ingene0.50

Targeting Hypotheses (30)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
LPS-TLR4-NF-κB Signaling Cascade as Therapeutic Target 7.200 neurodegeneration Gut-Brain Axis in Parkinson's Disease: M
CLU/APOE Duality in Amyloid Clearance Determines Cell-Type-S 0.811 neurodegeneration What are the cell-type-specific transcri
Beta-Hydroxybutyrate Receptor (HCAR2) Signaling Links Ketone 0.808 neurodegeneration What are the precise temporal dynamics o
IL-6 Trans-Signaling Blockade at the Oligodendrocyte-Microgl 0.806 neuroinflammation How do oligodendrocytes initiate neuroin
Hypothesis 1: MANF/CDNF Signaling as Primary Neuroprotective 0.798 neurodegeneration View
Microglial-Mediated Tau Clearance Dysfunction via TREM2 Sign 0.792 neuroscience Circuit-level neural dynamics in neurode
CX3CR1-TREM2 Integration for Synapse Pruning Normalization 0.776 neurodegeneration TREM2 agonism vs antagonism in DAM micro
Direct Toxicity Hypothesis: β-Amyloid Directly Impairs Choli 0.769 - Do β-amyloid plaques and neurofibrillary
Astrocyte C3aR Signaling as Bifurcation Point for A1/A2 Fate 0.750 Alzheimer's disease, Parkinson's disease -
Engineered Apolipoprotein E4-Neutralizing Shuttle Peptides 0.718 neurodegeneration Blood-brain barrier transport mechanisms
Purinergic Signaling Polarization Control 0.713 neurodegeneration Astrocyte reactivity subtypes in neurode
Selective LXRβ agonists restore ABCA1/ABCG1 expression and A 0.710 neuroscience APOE4-driven lipid metabolism dysregulat
TDP-43 condensation thermodynamics as a therapeutic target a 0.710 neuroscience How can subcellular compartmentalization
Matrix Stiffness Normalization via Targeted Lysyl Oxidase In 0.709 neurodegeneration Perivascular spaces and glymphatic clear
TREM2-Dependent Switch Hypothesis: TREM2 Agonism Redirects S 0.708 synaptic biology Does SPP1-mediated synaptic engulfment r
Astrocytic-Mediated Tau Clearance Dysfunction via TREM2 Sign 0.672 neuroscience Circuit-level neural dynamics in neurode
Fyn-anchored dendritic tau/NMDAR signaling persists after tr 0.670 neurodegeneration Does tau dendritic missorting persist in
Dissociating SCFA's Dual Signaling Through GPR43/GPR41 Biase 0.670 neurodegeneration Do SCFAs directly modulate α-synuclein a
Enhancing Vagal Cholinergic Signaling to Restore Gut-Brain A 0.669 neurodegeneration What are the mechanisms by which gut mic
Chronic cGAS/STING Hyperactivation Drives Progressive Neurod 0.660 neuroinflammation How does chronic cGAS/STING activation d
EPO Set Point Calibration Hypothesis 0.653 endocrinology Does TRT-induced erythrocytosis actually
Nucleolar Stress Response Normalization 0.653 neurodegeneration RNA binding protein dysregulation across
Age-Dependent TREM2 Signaling Disrupts Astrocyte-Microglia C 0.649 neurodegeneration Gene expression changes in aging mouse b
Parthenolide reduces tonic ADORA2A signaling by lowering inf 0.640 neuropharmacology How does parthenolide specifically modul
Layer V excitatory neurons show selectively enhanced vulnera 0.632 Alzheimer's disease SEA-AD Single-Cell Analysis: Cell-Type V
C1q has spatially distinct functions, with synapse-bound C1q 0.630 neurodegeneration Does C1q function differ based on subcel
APOE4-microglial complement signaling causes cholinergic-enr 0.630 neurodegeneration What determines the temporal sequence of
ATF4-DDIT3 stress signaling indirectly represses MAPT transc 0.624 neurodegeneration Which specific transcription factors med
Retromer-dependent retrograde endosomal signaling compartmen 0.620 neuroscience How can subcellular compartmentalization
PDGF-BB/PDGFRβ/STAT3 Paracrine Signaling Axis Mediates Aβ-In 0.618 neurodegeneration How do perivascular cells specifically r

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Experiments (9)

Experimental studies targeting or related to this entity

ExperimentTypeDiseaseScoreFeasibilityModelStatusEst. Cost
iPSC-derived astrocyte-neuron co-culture mitochondrial transfer in PD exploratory Parkinson's disease 0.900 0.00 iPSC-derived dopaminergic neur proposed N/A
AD Amyloid-Resilient Phenotype Study — Why Some amyloid-Positive Indiv clinical Alzheimer's Disease 0.400 0.50 human proposed $6,550,000
AD Combination Therapy Trial: Anti-Aβ + Anti-Tau clinical Alzheimer's Disease 0.400 0.50 cell_line proposed $180,000
Why Does Amyloid Removal Only Slow Decline 27%? — Mechanistic investig clinical Alzheimer's Disease 0.400 0.50 human proposed $7,100,000
ApoE4 Function in Alzheimer's Disease validation Alzheimer's Disease 0.400 0.50 mouse proposed $360,000
Blood-Based Biomarker Panel for Early AD Detection clinical Alzheimer's Disease 0.400 0.50 cell_line proposed $220,000
Down Syndrome Alzheimer's Disease: Mechanisms and Therapeutic Timing clinical Alzheimer's Disease 0.400 0.50 human proposed $7,500,000
Metal Ion Homeostasis Dysregulation in Alzheimer's Disease validation Alzheimer's Disease 0.400 0.50 human proposed $2,730,000
Sex Differences in Alzheimer's Disease — mechanisms and therapeutic im clinical Alzheimer's Disease 0.400 0.50 human proposed $7,500,000

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
Interplay of Low-Density Lipoprotein Receptors, LRPs, and Lipoproteins in Pulmon [PMID:35257044] Calvier L, Herz J, Hansmann G JACC Basic Transl Sci 2022 1
ApoE in Alzheimer's disease: pathophysiology and therapeutic strategies. [PMID:36348357] Raulin AC, Doss SV, Trottier ZA, Ikezu T Mol Neurodegener 2022 1
Lysosome-targeting chimaeras for degradation of extracellular proteins. [PMID:32728216] Banik SM, Pedram K, Wisnovsky S, Ahn G, Nature 2020 1
Myeloid-Specific Deletion of Epsins 1 and 2 Reduces Atherosclerosis by Preventin [PMID:30595089] Brophy ML, Dong Y, Tao H, Yancey PG, Son Circ Res 2019 1
Role of LRP1 in the pathogenesis of Alzheimer's disease: evidence from clinical [PMID:28381441] Shinohara M, Tachibana M, Kanekiyo T, Bu J Lipid Res 2017 1
Integrative Multiomics Insights into the Genetic and Epigenetic Architecture of [PMID:41422555] Mishra AK, Jain S ACS Chem Neurosci 2026 0
Peripheral cancer attenuates amyloid pathology in Alzheimer's disease via cystat [PMID:41576952] Li X, Tang X, Zeng J, Duan L, Hou Z et a Cell 2026 0
The association of Alzheimer's disease-related SNPs with mild cognitive impairme [PMID:41606232] Xie Z, Tu W, Ye XF, Hua L, Zhang X et al Sci Rep 2026 0
Genetic risk factors of late-onset Alzheimer's disease: Insights into pathophysi [PMID:41622452] Akkaoui J, Devadoss D, Rodriguez MD, Ari Neural Regen Res 2026 0
Genetic Burden and <i>APOE</i> Methylation in a Korean Multi-Generational Alzhei [PMID:41745359] Eom Je-Hyun; Cho Mu-Yeol; Kim Ji-Won; Ki Journal of personalized medici 2026 0
Genetic Architecture of Cognitive Resilience in Alzheimer's Disease: Mechanisms, [PMID:41893052] Burdman Gabriel; Akkaoui Juliet; Colon N Neurology international 2026 0
Posttraumatic stress disorder is associated with Alzheimer's disease-relevant mo [PMID:41960318] Seijo MA, Yohannes PA, Rogers AL, Gonzal Res Sq 2026 0
Genetic risk factors of late-onset Alzheimer's disease: Insights into pathophysi [PMID:41622452] Akkaoui J, Devadoss D, Rodriguez MD, Ari Neural regeneration research 2026 0
Genetic Architecture of Cognitive Resilience in Alzheimer's Disease: Mechanisms, [PMID:41893052] ["Burdman G", "Akkaoui J", "Colon N", "P Neurology international 2026 0
APOE-Targeted Therapeutics for Alzheimer's Disease. [PMID:41224653] ["Yassine H", "Hugo C", "O'Donovan B", " The Journal of neuroscience : 2025 0
Cerebral Microbleeds and Amyloid Pathology Estimates From the Amyloid Biomarker [PMID:39841474] ["Oomens J", "van Gils V", "Vos S", "Fre JAMA network open 2025 0
AMBP protects against aortic valve calcification by inhibiting ERK1/2 and JNK pa [PMID:40225558] ["Guo C", "Liu X", "Mei Z", "Chang M", " Theranostics 2025 0
Blood-based pre-screening in the SKYLINE secondary prevention Ph3 gantenerumab s [PMID:41085131] ["Bauer A", "Rabe C", "Schiffman C", "Ro Alzheimer's & dementia : the j 2025 0
ApoE-Corona oncolytic adenovirus nanoparticles enable blood-brain barrier penetr [PMID:40987376] Ge T, Niu A, Lv Y, Chen Y, Liu Y, Lei X, Journal of controlled release 2025 0
Apolipoprotein E controls Dectin-1-dependent development of monocyte-derived alv [PMID:38671323] ["Theobald H", "Bejarano D", "Katzmarski Nature immunology 2024 0

Debates (0)

Multi-agent debates referencing this entity

No debates reference this entity

Related Research

Hypotheses and analyses mentioning ALI in their description or question text

Microglial-Mediated Tau Clearance Dysfunction via TREM2 Signaling

Score: 0.792 · neuroscience · 2026-04-07

## Mechanistic Overview Microglial-Mediated Tau Clearance Dysfunction via TREM2 Signaling starts from the claim that mod

CX3CR1-TREM2 Integration for Synapse Pruning Normalization

Score: 0.776 · neurodegeneration · 2026-04-16

## Mechanistic Overview CX3CR1-TREM2 Integration for Synapse Pruning Normalization starts from the claim that modulating

Direct Toxicity Hypothesis: β-Amyloid Directly Impairs Cholinergic Signaling

Score: 0.769 · unknown disease · 2026-04-12

## Mechanistic Overview Direct Toxicity Hypothesis: β-Amyloid Directly Impairs Cholinergic Signaling starts from the cla

Engineered Apolipoprotein E4-Neutralizing Shuttle Peptides

Score: 0.718 · neurodegeneration · 2026-04-02

## Mechanistic Overview Engineered Apolipoprotein E4-Neutralizing Shuttle Peptides starts from the claim that modulating

Purinergic Signaling Polarization Control

Score: 0.713 · neurodegeneration · 2026-04-02

## Mechanistic Overview Purinergic Signaling Polarization Control starts from the claim that modulating P2RY1 and P2RX7

Selective LXRβ agonists restore ABCA1/ABCG1 expression and APOE lipidation in AP

Score: 0.710 · neuroscience · 2026-04-22

**Molecular Mechanism and Rationale** The molecular basis for selective liver X receptor beta (LXRβ/NR1H2) agonism in A

TDP-43 condensation thermodynamics as a therapeutic target and biomarker for nuc

Score: 0.710 · neuroscience · 2026-04-26

FRAP-based measurement of TDP-43 liquid-liquid phase separation state provides a continuous biomarker of nuclear-cytopla

Matrix Stiffness Normalization via Targeted Lysyl Oxidase Inhibition

Score: 0.709 · neurodegeneration · 2026-04-02

## **Molecular Mechanism and Rationale** The lysyl oxidase (LOX) family comprises six enzymes—LOX, LOXL1, LOXL2, LOXL3,

TREM2-Dependent Switch Hypothesis: TREM2 Agonism Redirects SPP1 Signaling from D

Score: 0.708 · synaptic biology · 2026-04-21

## Mechanistic Overview TREM2-Dependent Switch Hypothesis: TREM2 Agonism Redirects SPP1 Signaling from Destructive to Re

Astrocytic-Mediated Tau Clearance Dysfunction via TREM2 Signaling

Score: 0.672 · neuroscience · 2026-04-12

## **Molecular Mechanism and Rationale** The astrocytic-mediated tau clearance dysfunction hypothesis centers on the pa

Fyn-anchored dendritic tau/NMDAR signaling persists after transient Aβ exposure

Score: 0.670 · neurodegeneration · 2026-04-25

Aβ drives tau into dendritic spines, where tau binds Fyn and stabilizes a PSD95-NMDAR-associated excitotoxic scaffold. O

Dissociating SCFA's Dual Signaling Through GPR43/GPR41 Biased Agonism

Score: 0.670 · neurodegeneration · 2026-04-13

## Mechanistic Overview Dissociating SCFA's Dual Signaling Through GPR43/GPR41 Biased Agonism starts from the claim that

Enhancing Vagal Cholinergic Signaling to Restore Gut-Brain Anti-Inflammatory Com

Score: 0.669 · neurodegeneration · 2026-04-02

## Mechanistic Overview Enhancing Vagal Cholinergic Signaling to Restore Gut-Brain Anti-Inflammatory Communication start

Chronic cGAS/STING Hyperactivation Drives Progressive Neurodegeneration Through

Score: 0.660 · neuroinflammation · 2026-04-21

## Mechanistic Overview Chronic cGAS/STING Hyperactivation Drives Progressive Neurodegeneration Through Sustained Type I