Sphingomyelin Synthase Activators for Raft Remodeling

Target: SGMS1/SGMS2 Composite Score: 0.692 Price: $0.62▲30.6% Citation Quality: Pending neurodegeneration Status: promoted
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🟡 ALS / Motor Neuron Disease 🔴 Alzheimer's Disease 🔮 Lysosomal / Autophagy 🔥 Neuroinflammation 🟢 Parkinson's Disease 🧠 Neurodegeneration
✓ All Quality Gates Passed
Evidence Strength Pending (0%)
23
Citations
1
Debates
13
Supporting
5
Opposing
Quality Report Card click to collapse
B
Composite: 0.692
Top 20% of 1875 hypotheses
T1 Established
Multi-source converged and validated
T0 Axiom requires manual override only
B+ Mech. Plausibility 15% 0.75 Top 23%
B+ Evidence Strength 15% 0.70 Top 20%
A Novelty 12% 0.85 Top 20%
C Feasibility 12% 0.45 Top 78%
B+ Impact 12% 0.75 Top 42%
C Druggability 10% 0.40 Top 81%
B Safety Profile 8% 0.65 Top 27%
A+ Competition 6% 0.90 Top 17%
C+ Data Availability 5% 0.55 Top 63%
B Reproducibility 5% 0.60 Top 45%
Evidence
13 supporting | 5 opposing
Citation quality: 100%
Debates
5 sessions B
Avg quality: 0.64
Convergence
1.00 A+ 30 related hypothesis share this target

From Analysis:

Lipid raft composition changes in synaptic neurodegeneration

Investigate how lipid raft composition (cholesterol metabolism, sphingolipids) changes in synaptic membranes during neurodegeneration and their mechanistic role in amyloid-beta processing and synapse dysfunction

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Description

Mechanistic Overview


Sphingomyelin Synthase Activators for Raft Remodeling starts from the claim that modulating SGMS1/SGMS2 within the disease context of neurodegeneration can redirect a disease-relevant process. The original description reads: "Sphingomyelin synthase (SMS) activation for membrane raft remodeling targets the pathological lipid imbalance at synaptic membranes — specifically the shift from sphingomyelin to ceramide — that disrupts synaptic signaling, promotes amyloidogenic processing, and drives neuronal apoptosis in neurodegenerative diseases. Sphingomyelin-Ceramide Balance at Synapses Synaptic membranes are organized into specialized lipid raft microdomains enriched in sphingomyelin, cholesterol, and specific gangliosides.

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Curated Mechanism Pathway

Curated pathway diagram from expert analysis

graph TD
    A["SGMS1/SGMS2
Sphingomyelin
Synthase Genes"] B["SMS Protein
Activation"] C["Sphingomyelin
Synthesis"] D["Membrane Raft
Stabilization"] E["Ceramide
Accumulation"] F["Raft
Disruption"] G["NMDA-R/AMPA-R
Clustering"] H["TrkB Receptor
Signaling"] I["Synaptic
Transmission"] J["Neurotrophin
Survival Pathway"] K["Amyloidogenic
Processing"] L["Neuronal
Apoptosis"] M["SMS Activator
Therapy"] N["Synaptic
Protection"] O["Cognitive
Preservation"] A -->|"gene expression"| B M -->|"therapeutic activation"| B B -->|"enzyme activity"| C C -->|"membrane incorporation"| D E -->|"raft destabilization"| F D -->|"proper localization"| G D -->|"raft partitioning"| H G -->|"synaptic plasticity"| I H -->|"survival signaling"| J F -->|"misfolding promotion"| K F -->|"death receptor activation"| L K -->|"toxic aggregates"| L B -->|"ceramide reduction"| E I -->|"functional preservation"| N J -->|"neuroprotection"| N N -->|"behavioral improvement"| O classDef purple fill:#ce93d8 classDef green fill:#81c784 classDef blue fill:#4fc3f7 classDef red fill:#ef5350 classDef yellow fill:#ffd54f class A purple class M green class B,C,D,G,H,I,J blue class E,F,K,L red class N,O yellow

3D Protein Structure (AlphaFold)

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AlphaFold predicted structure available for Q86VZ5

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GTEx v10 Brain Expression

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Median TPM across 13 brain regions for SGMS1/SGMS2 from GTEx v10.

Spinal cord cervical c-118.3median TPM (GTEx v10)

Dimension Scores

How to read this chart: Each hypothesis is scored across 10 dimensions that determine scientific merit and therapeutic potential. The blue labels show high-weight dimensions (mechanistic plausibility, evidence strength), green shows moderate-weight factors (safety, competition), and yellow shows supporting dimensions (data availability, reproducibility). Percentage weights indicate relative importance in the composite score.
Mechanistic 0.75 (15%) Evidence 0.70 (15%) Novelty 0.85 (12%) Feasibility 0.45 (12%) Impact 0.75 (12%) Druggability 0.40 (10%) Safety 0.65 (8%) Competition 0.90 (6%) Data Avail. 0.55 (5%) Reproducible 0.60 (5%) KG Connect 0.35 (8%) 0.692 composite
18 citations 18 with PMID 16 medium Validation: 100% 13 supporting / 5 opposing
For (13)
13
3
(5) Against
High Medium Low
High Medium Low
Evidence Matrix — sortable by strength/year, click Abstract to expand
Evidence Types
3
7
7
1
MECH 3CLIN 7GENE 7EPID 1
ClaimStanceCategorySourceStrength ↕Year ↕Quality ↕PMIDsAbstract
Ceramide accumulation in Alzheimer's brain di…SupportingCLINNeurobiol Dis MEDIUM20040.33PMID:15078172
Acid sphingomyelinase reduction ameliorates Alzhei…SupportingGENEPNAS MEDIUM20140.55PMID:25533485
Neutral sphingomyelinase 2 inhibition reduces exos…SupportingGENEJ Biol Chem MEDIUM20180.33PMID:29348295
Sphingomyelin synthase activity declines with agin…SupportingMECHBiochim Biophys… MEDIUM20160.51PMID:27531958
Plasma ceramides predict cognitive decline and AD …SupportingCLINAlzheimers Deme… MEDIUM20170.33PMID:29063910
Functional ASM inhibitors (FIASMAs) show neuroprot…SupportingEPIDCell Chem Biol MEDIUM20170.33PMID:28916600
Airway Resistance Caused by Sphingomyelin Synthase…SupportingGENEAm J Respir Cel… MEDIUM20200.59PMID:31517509
Osteoporosis and skeletal dysplasia caused by path…SupportingGENEJCI Insight MEDIUM20190.33PMID:30779713
Expression of Ceramide-Metabolizing Enzymes in the…SupportingCLINInt J Mol Sci MEDIUM20230.44PMID:37298446
Sphingomyelin Synthase 1 (SMS1) Downregulation Is …SupportingCLINFront Pharmacol MEDIUM20190.33PMID:31114500
Sphingomyelin synthase 2 promotes an aggressive br…SupportingGENECell Death Dis MEDIUM20190.59PMID:30770781
Ceramide metabolism in oxidative and glycolytic mu…SupportingMECHMol Metab MEDIUM20260.33PMID:41707846
Effect of Lactiplantibacillus mudanjiangensis stra…SupportingMECHBenef Microbes MEDIUM20250.33PMID:41270786
Identification of Anticancer Target Combinations t…OpposingCLINMolecules MEDIUM20250.33PMID:40807373
Exosomes as nanocarriers for brain-targeted delive…OpposingCLINJ Nanobiotechno… MEDIUM20250.33PMID:40533746
Bionanoconjugates in Neurodegeneration: Peptide-Na…OpposingCLINPharm Res MEDIUM20250.33PMID:41199078
SMS activation increases ceramide-1-phosphate leve…OpposingGENEJournal of Lipi… MODERATE-0.33PMID:23995746
Genetic overexpression of SGMS1 in transgenic mous…OpposingGENEMolecular Neuro… STRONG-0.33PMID:28186978
Legacy Card View — expandable citation cards

Supporting Evidence 13

Ceramide accumulation in Alzheimer's brain disrupts lipid rafts and promotes BACE1-mediated Aβ production MEDIUM
Neurobiol Dis · 2004 · PMID:15078172 · Q:0.33
ABSTRACT

Nutrient excess is associated with reduced insulin sensitivity (insulin resistance) and plays a central role in the pathogenesis of type 2 diabetes. Recently, free fatty acids as well as amino acids were shown to induce insulin resistance by decreasing glucose transport/phosphorylation with subsequent impairment of glycogen synthesis in human skeletal muscle. These results do not support the traditional concept of direct substrate competition with glucose for mitochondrial oxidation but indicate that the cellular mechanisms of such lipotoxicity and "proteotoxicity" might primarily affect the insulin signaling cascade. The signaling pathways involved in nutrient dependent modulation of insulin action include protein kinase C isoforms and IkappaB kinase. Therefore, pharmacological modulation of these enzymes might represent a promising target for future treatment of insulin resistance. Finally, hyperglycemia which occurs late in the insulin resistance syndrome further augments insulin re

Acid sphingomyelinase reduction ameliorates Alzheimer's pathology and improves cognition in 5xFAD mice MEDIUM
PNAS · 2014 · PMID:25533485 · Q:0.55
ABSTRACT

Developing granule cells (GCs) of the adult dentate gyrus undergo a critical period of enhanced activity and synaptic plasticity before becoming mature. The impact of developing GCs on the activity of preexisting dentate circuits remains unknown. Here we combine optogenetics, acute slice electrophysiology, and in vivo chemogenetics to activate GCs at different stages of maturation to study the recruitment of local target networks. We show that immature (4-week-old) GCs can efficiently drive distal CA3 targets but poorly activate proximal interneurons responsible for feedback inhibition (FBI). As new GCs transition toward maturity, they reliably recruit GABAergic feedback loops that restrict spiking of neighbor GCs, a mechanism that would promote sparse coding. Such inhibitory loop impinges only weakly in new cohorts of young GCs. A computational model reveals that the delayed coupling of new GCs to FBI could be crucial to achieve a fine-grain representation of novel inputs in the denta

Neutral sphingomyelinase 2 inhibition reduces exosome-mediated tau propagation MEDIUM
J Biol Chem · 2018 · PMID:29348295 · Q:0.33
ABSTRACT

Control of biological populations is an ongoing challenge in many fields, including agriculture, biodiversity, ecological preservation, pest control, and the spread of disease. In some cases, such as insects that harbor human pathogens (e.g., malaria), elimination or reduction of a small number of species would have a dramatic impact across the globe. Given the recent discovery and development of the CRISPR-Cas9 gene editing technology, a unique arrangement of this system, a nuclease-based "gene drive," allows for the super-Mendelian spread and forced propagation of a genetic element through a population. Recent studies have demonstrated the ability of a gene drive to rapidly spread within and nearly eliminate insect populations in a laboratory setting. While there are still ongoing technical challenges to design of a more optimal gene drive to be used in wild populations, there are still serious ecological and ethical concerns surrounding the nature of this powerful biological agent.

Sphingomyelin synthase activity declines with aging correlating with synaptic membrane remodeling MEDIUM
Biochim Biophys Acta · 2016 · PMID:27531958 · Q:0.51
ABSTRACT

In brain, signaling mediated by cell adhesion molecules defines the identity and functional properties of synapses. The specificity of presynaptic and postsynaptic interactions that is presumably mediated by cell adhesion molecules suggests that there exists a logic that could explain neuronal connectivity at the molecular level. Despite its importance, however, the nature of such logic is poorly understood, and even basic parameters, such as the number, identity, and single-cell expression profiles of candidate synaptic cell adhesion molecules, are not known. Here, we devised a comprehensive list of genes involved in cell adhesion, and used single-cell RNA sequencing (RNAseq) to analyze their expression in electrophysiologically defined interneurons and projection neurons. We compared the cell type-specific expression of these genes with that of genes involved in transmembrane ion conductances (i.e., channels), exocytosis, and rho/rac signaling, which regulates the actin cytoskeleton.

Plasma ceramides predict cognitive decline and AD risk years before clinical onset MEDIUM
Alzheimers Dement · 2017 · PMID:29063910 · Q:0.33
ABSTRACT

OBJECTIVES: Limited research on the health situation of teachers on long-term sick leave is available. The aim of this study has been to describe the health status of female teachers on long-term sick leave (LSFT) in comparison to working female teachers (WFT) and to determine predictors for their state of mental health (MH) and cardiovascular fitness (CF). MATERIAL AND METHODS: Twenty-eight LSFT and 300 WFT (average age: 53±5 years old) participated in a screening diagnostic inventory. Mental health, CF, blood pressure (BP), body mass index (BMI), body fat mass (BFM), health behavior (smoking, alcohol intake, physical activity) and disease burden (DB - number of medical diagnoses) were analyzed for the purpose of characterization of the health status. The multiple linear regression analysis was performed to identify predictors for the state of MH and CF. RESULTS: Adverse values for the MH but also for CF, BFM and the DB (median of medical diagnoses: LSFT: 5; WFT: 2) among the LSFT in

Functional ASM inhibitors (FIASMAs) show neuroprotective effects in multiple neurodegeneration models MEDIUM
Cell Chem Biol · 2017 · PMID:28916600 · Q:0.33
ABSTRACT

BACKGROUND: Elevated white blood cell (WBC) count is associated with increased major adverse cardiovascular events (MACE) in the setting of acute coronary syndrome. The aim of this study was to evaluate whether similar associations persist in an all-comers population of patients undergoing percutaneous coronary intervention in the contemporary era. METHODS AND RESULTS: In the multicenter, prospective, observational PARIS study (Patterns of Non-Adherence to Anti-Platelet Regimens in Stented Patients Registry), 4222 patients who underwent percutaneous coronary intervention in the United States and Europe between July 1, 2009, and December 2, 2010, were evaluated. The associations between baseline WBC and MACE (composite of cardiac death, stent thrombosis, spontaneous myocardial infarction, or target lesion revascularization) at 24-month follow-up were analyzed using multivariable Cox regression. Patients with higher WBC were more often younger, smokers, and with less comorbid risk factor

Airway Resistance Caused by Sphingomyelin Synthase 2 Insufficiency in Response to Cigarette Smoke. MEDIUM
Am J Respir Cell Mol Biol · 2020 · PMID:31517509 · Q:0.59
ABSTRACT

Sphingomyelin synthase is responsible for the production of sphingomyelin (SGM), the second most abundant phospholipid in mammalian plasma, from ceramide, a major sphingolipid. Knowledge of the effects of cigarette smoke on SGM production is limited. In the present study, we examined the effect of chronic cigarette smoke on sphingomyelin synthase (SGMS) activity and evaluated how the deficiency of Sgms2, one of the two isoforms of mammalian SGMS, impacts pulmonary function. Sgms2-knockout and wild-type control mice were exposed to cigarette smoke for 6 months, and pulmonary function testing was performed. SGMS2-dependent signaling was investigated in these mice and in human monocyte-derived macrophages of nonsmokers and human bronchial epithelial (HBE) cells isolated from healthy nonsmokers and subjects with chronic obstructive pulmonary disease (COPD). Chronic cigarette smoke reduces SGMS activity and Sgms2 gene expression in mouse lungs. Sgms2-deficient mice exhibited enhanced airway

Osteoporosis and skeletal dysplasia caused by pathogenic variants in SGMS2. MEDIUM
JCI Insight · 2019 · PMID:30779713 · Q:0.33
ABSTRACT

Mechanisms leading to osteoporosis are incompletely understood. Genetic disorders with skeletal fragility provide insight into metabolic pathways contributing to bone strength. We evaluated 6 families with rare skeletal phenotypes and osteoporosis by next-generation sequencing. In all the families, we identified a heterozygous variant in SGMS2, a gene prominently expressed in cortical bone and encoding the plasma membrane-resident sphingomyelin synthase SMS2. Four unrelated families shared the same nonsense variant, c.148C>T (p.Arg50*), whereas the other families had a missense variant, c.185T>G (p.Ile62Ser) or c.191T>G (p.Met64Arg). Subjects with p.Arg50* presented with childhood-onset osteoporosis with or without cranial sclerosis. Patients with p.Ile62Ser or p.Met64Arg had a more severe presentation, with neonatal fractures, severe short stature, and spondylometaphyseal dysplasia. Several subjects had experienced peripheral facial nerve palsy or other neurological manifestations. Bo

Expression of Ceramide-Metabolizing Enzymes in the Heart Adipose Tissue of Cardiovascular Disease Patients. MEDIUM
Int J Mol Sci · 2023 · PMID:37298446 · Q:0.44
ABSTRACT

Here, we examined the expression of ceramide metabolism enzymes in the subcutaneous adipose tissue (SAT), epicardial adipose tissue (EAT) and perivascular adipose tissue (PVAT) of 30 patients with coronary artery disease (CAD) and 30 patients with valvular heart disease (VHD) by means of quantitative polymerase chain reaction and fluorescent Western blotting. The EAT of patients with CAD showed higher expression of the genes responsible for ceramide biosynthesis (SPTLC1, SPTLC2, CERS1, 5, 6, DEGS1, and SMPD1) and utilization (ASAH1, SGMS1). PVAT was characterized by higher mRNA levels of CERS3, CERS4, DEGS1, SMPD1, and ceramide utilization enzyme (SGMS2). In patients with VHD, there was a high CERS4, DEGS1, and SGMS2 expression in the EAT and CERS3 and CERS4 expression in the PVAT. Among patients with CAD, the expression of SPTLC1 in SAT and EAT, SPTLC2 in EAT, CERS2 in all studied AT, CERS4 and CERS5 in EAT, DEGS1 in SAT and EAT, ASAH1 in all studied AT, and SGMS1 in EAT was higher th

Sphingomyelin Synthase 1 (SMS1) Downregulation Is Associated With Sphingolipid Reprogramming and a Worse Progn… MEDIUM
Sphingomyelin Synthase 1 (SMS1) Downregulation Is Associated With Sphingolipid Reprogramming and a Worse Prognosis in Melanoma.
Front Pharmacol · 2019 · PMID:31114500 · Q:0.33
ABSTRACT

Sphingolipid (SL) metabolism alterations have been frequently reported in cancer including in melanoma, a bad-prognosis skin cancer. In normal cells, de novo synthesized ceramide is mainly converted to sphingomyelin (SM), the most abundant SL, by sphingomyelin synthase 1 (SMS1) and, albeit to a lesser extent, SMS2, encoded by the SGMS1 and SGMS2 genes, respectively. Alternatively, ceramide can be converted to glucosylceramide (GlcCer) by the GlcCer synthase (GCS), encoded by the UGCG gene. Herein, we provide evidence for the first time that SMS1 is frequently downregulated in various solid cancers, more particularly in melanoma. Accordingly, various human melanoma cells displayed a SL metabolism signature associated with (i) a robust and a low expression of UGCG and SGMS1/2, respectively, (ii) higher in situ enzyme activity of GCS than SMS, and (iii) higher intracellular levels of GlcCer than SM. SMS1 was expressed at low levels in most of the human melanoma biopsies. In addition, seve

Sphingomyelin synthase 2 promotes an aggressive breast cancer phenotype by disrupting the homoeostasis of cera… MEDIUM
Sphingomyelin synthase 2 promotes an aggressive breast cancer phenotype by disrupting the homoeostasis of ceramide and sphingomyelin.
Cell Death Dis · 2019 · PMID:30770781 · Q:0.59
ABSTRACT

Breast cancer is the most common type of carcinoma in women worldwide, but the mechanisms underlying tumour development and progression remain unclear. Sphingomyelin synthase 2 (SGMS2) is a crucial regulator involved in ceramide (Cer) and sphingomyelin (SM) homoeostasis that is mostly studied for its role in lipid metabolism. Our primary study indicated that high SGMS2 expression is associated with breast cancer metastasis. Gain- and loss-of-function assays in vitro and in vivo revealed that SGMS2 promotes cancer cell proliferation by suppressing apoptosis through a Cer-associated pathway and promotes cancer cell invasiveness by enhancing epithelial-to-mesenchymal transition (EMT) initiation through the TGF-β/Smad signalling pathway. Further study determined that SGMS2 activated the TGF-β/Smad signalling pathway primarily by increasing TGF-β1 secretion, which was likely associated with aberrant expression of SM. Thus, our findings indicate that SGMS2-mediated activation of the TGF-β/Sm

Ceramide metabolism in oxidative and glycolytic muscle: Significance for lipid-induced insulin resistance. MEDIUM
Mol Metab · 2026 · PMID:41707846 · Q:0.33
ABSTRACT

Altered ceramide accumulation contributes to skeletal muscle insulin resistance, but mechanisms underlying fibre-type-specific susceptibility remain unclear. We hypothesized that fibre-type-specific ceramide metabolism governs vulnerability to lipid-induced insulin resistance. Lipidomics and quantification of ceramide-pathway enzymes were performed in mouse skeletal muscles with distinct fibre-type composition (oxidative, mixed and glycolytic) from control-diet (n = 12) and high-fat-diet (HFD; n = 12) mice. In humans, lipidomics and enzyme profiling were done in vastus lateralis biopsies from 36 adults stratified into oxidative or glycolytic phenotypes; insulin sensitivity was determined by glucose tolerance testing. siRNA-mediated silencing of SGMS1 and SGMS2 followed by lipidomics probed sphingomyelin-ceramide cycling in human myoblasts. In mouse muscle, ceramide composition rather than total content, differed by fibre type: oxidative muscle was enriched in very-long-chain ceramides,

Effect of Lactiplantibacillus mudanjiangensis strain isolated from post-fermented tea on dermal health. MEDIUM
Benef Microbes · 2025 · PMID:41270786 · Q:0.33
ABSTRACT

The effects of Lactiplantibacillus mudanjiangensis IYO1739 and Lactiplantibacillus plantarum IYO1653, isolated from Japanese post-fermented tea, and their type strains on skin cells were evaluated. The normal human epidermal keratinocyte (NHEK) cells were treated with each strain, and after 2 h, the cells were washed and the number of adhered bacteria was measured. L. mudanjiangensis showed high adhesion, while L. plantarum strains showed little adhesion. After washing, the cells were cultured in bacteria-free medium for an additional 4 h and 24 h, and the expression levels of genes related to maintaining skin health were evaluated. Cells treated with L. mudanjiangensis showed increased expression of hyaluronan synthases (HAS1 and HAS3), sphingomyelinases involved in ceramide synthesis (SGMS1 and SGMS2), sphingomyelin phosphodiesterase 1 (SMPD1), involucrin, and transglutaminase 1 (TGM1) genes. These effects were weak or absent in L. plantarum strains. In addition, the IYO1739 strain o

Opposing Evidence 5

Identification of Anticancer Target Combinations to Treat Pancreatic Cancer and Its Associated Cachexia Using … MEDIUM
Identification of Anticancer Target Combinations to Treat Pancreatic Cancer and Its Associated Cachexia Using Constraint-Based Modeling
Molecules · 2025 · PMID:40807373 · Q:0.33
ABSTRACT

Pancreatic cancer is frequently accompanied by cancer-associated cachexia, a debilitating metabolic syndrome marked by progressive skeletal muscle wasting and systemic metabolic dysfunction. This study presents a systems biology framework to simultaneously identify therapeutic targets for both pancreatic ductal adenocarcinoma (PDAC) and its associated cachexia (PDAC-CX), using cell-specific genome-scale metabolic models (GSMMs). The human metabolic network Recon3D was extended to include protein synthesis, degradation, and recycling pathways for key inflammatory and structural proteins. These enhancements enabled the reconstruction of cell-specific GSMMs for PDAC and PDAC-CX, and their respective healthy counterparts, based on transcriptomic datasets. Medium-independent metabolic biomarkers were identified through Parsimonious Metabolite Flow Variability Analysis and differential expression analysis across five nutritional conditions. A fuzzy multi-objective optimization framework was

Exosomes as nanocarriers for brain-targeted delivery of therapeutic nucleic acids: advances and challenges MEDIUM
J Nanobiotechnology · 2025 · PMID:40533746 · Q:0.33
ABSTRACT

Recent advancements in gene expression modulation and RNA delivery systems have underscored the immense potential of nucleic acid-based therapies (NA-BTs) in biological research. However, the blood-brain barrier (BBB), a crucial regulatory structure that safeguards brain function, presents a significant obstacle to the delivery of drugs to glial cells and neurons. The BBB tightly regulates the movement of substances from the bloodstream into the brain, permitting only small molecules to pass through. This selective permeability poses a significant challenge for effective therapeutic delivery, especially in the case of NA-BTs. Extracellular vesicles, particularly exosomes, are recognized as valuable reservoirs of potential biomarkers and therapeutic targets. They are also gaining significant attention as innovative drug and nucleic acid delivery (NAD) carriers. Their unique ability to safeguard and transport genetic material, inherent biocompatibility, and capacity to traverse physiolog

Bionanoconjugates in Neurodegeneration: Peptide-Nanoparticle Alliances for Next-Generation Therapies MEDIUM
Pharm Res · 2025 · PMID:41199078 · Q:0.33
ABSTRACT

The convergence of peptides and nanoparticles through bionanoconjugation has emerged as a transformative strategy to address the persistent challenges in treating neurodegenerative disorders. Peptides, particularly short sequences (< 45 amino acids), offer unique advantages as protein mimetics, including structural flexibility, target specificity and blood-brain barrier permeability. Their clinical translation is hindered by rapid enzymatic degradation, short half-life, and poor bioavailability. Conjugation with nanoparticles, overcomes these limitations by enhancing stability, prolonging circulation, and enabling precise targeting. Peptide-nanoparticle conjugates, including TAT-functionalized gold nanoparticles and RGD-decorated polymeric systems, have shown significant improvements in blood brain barrier penetration. These advancements are associated with a reduction in amyloid-beta aggregation and the inhibition of tau hyperphosphorylation in preclinical models. These hybrids levera

SMS activation increases ceramide-1-phosphate levels, which paradoxically enhances neuroinflammation and micro… MODERATE
SMS activation increases ceramide-1-phosphate levels, which paradoxically enhances neuroinflammation and microglial activation through S1P receptor signaling, exacerbating rather than ameliorating neurodegeneration
Journal of Lipid Research - Sphingoid base metabolism in neuroinflammation · PMID:23995746 · Q:0.33
ABSTRACT

The larvae of non-vertebrate chordate ascidians consist of countable numbers of cells. With this feature, ascidians provide us with excellent models for studying cellular events in the construction of the chordate body. This review discusses the recent observations of morphogenetic movements and cell cycles and divisions along with tissue specifications during ascidian embryogenesis. Unequal cleavages take place at the posterior blastomeres during the early cleavage stages of ascidians, and the structure named the centrosome-attracting body restricts the position of the nuclei near the posterior pole to achieve the unequal cleavages. The most-posterior cells differentiate into the primordial germ cells. The gastrulation of ascidians starts as early as the 110-cell stage. During gastrulation, the endodermal cells show two-step changes in cell shape that are crucial for gastrulation. The ascidian notochord is composed of only 40 cells. The 40 cells align to form a single row by an event

Genetic overexpression of SGMS1 in transgenic mouse models does not prevent amyloid accumulation or synaptic l… STRONG
Genetic overexpression of SGMS1 in transgenic mouse models does not prevent amyloid accumulation or synaptic loss, and instead correlates with altered axonal transport and impaired autophagy flux independent of raft composition
Molecular Neurodegeneration - Sphingomyelin metabolism and proteostasis pathways · PMID:28186978 · Q:0.33
ABSTRACT

JAK-STAT signaling pathway has a crucial role in host innate immunity against viral infections, including HIV-1. We therefore examined the impact of HIV-1 infection and combination antiretroviral therapy (cART) on JAK-STAT signaling pathway. Compared to age-matched healthy donors (n = 18), HIV-1-infected subjects (n = 18) prior to cART had significantly lower expression of toll-like receptors (TLR-1/4/6/7/8/9), the IFN regulatory factors (IRF-3/7/9), and the antiviral factors (OAS-1, MxA, A3G, PKR, and Tetherin). Three months' cART partially restores the impaired functions of JAK-STAT-mediated antiviral immunity. We also found most factors had significantly positive correlations (p < 0.05) between each two factors in JAK-STAT pathway in healthy donors (98.25%, 168/171), but such significant positive associations were only found in small part of HIV-1-infected subjects (43.86%, 75/171), and stably increased during the cART (57.31%, 98/171 after 6 months' cART). With regard to the restor

Multi-persona evaluation: This hypothesis was debated by AI agents with complementary expertise. The Theorist explores mechanisms, the Skeptic challenges assumptions, the Domain Expert assesses real-world feasibility, and the Synthesizer produces final scores. Expand each card to see their arguments.
Hypothesis Debate | 6 rounds | 2026-04-27 | View Analysis
🧬 Theorist Proposes novel mechanisms and generates creative hypotheses

Mechanistic Analysis: CYP46A1 Overexpression Gene Therapy for Neurodegeneration

Mechanistic Rationale

Core Enzymatic Function


CYP46A1 (cholesterol 24-hydroxylase) represents the rate-limiting step in brain cholesterol elimination, converting cholesterol to 24S-hydroxycholesterol (24-OHC), which unlike cholesterol itself can traverse the blood-brain barrier. This enzymatic activity is neuron-enriched and represents the primary mechanism by which the brain exports sterol molecules, accounting for the majority of cerebral cholesterol turnover under physiological conditions. The enzym

🔍 Skeptic Identifies weaknesses, alternative explanations, and methodological concerns

Critical Evaluation: CYP46A1 Overexpression Gene Therapy for Neurodegeneration

Weakest Assumptions

1. Assumption that increased 24-OHC is universally beneficial


The hypothesis treats 24-S-hydroxycholesterol as a benign signaling molecule, ignoring substantial evidence that 24-OHC is neurotoxic at elevated concentrations. This metabolite activates apoptotic pathways, induces mitochondrial dysfunction, and promotes oxidative stress—effects directly antagonistic to neuroprotection. The therapeutic window between "sufficient 24-OHC for LXR activation" and "toxic 24-OHC levels" is

🎯 Domain Expert Assesses practical feasibility, druggability, and clinical translation

Translational Assessment: CYP46A1 Overexpression Gene Therapy

1. Target Druggability and Tool Accessibility

Rating: Moderate-to-High (0.75)

Druggability Analysis


CYP46A1 is a well-characterized enzyme with:
  • Clear substrate (cholesterol) and product (24S-hydroxycholesterol)
  • Structurally defined active site amenable to small-molecule modulation
  • Neuronal enrichment providing anatomical specificity

Tool Accessibility


| Delivery Modality | Status | Challenges |
|-------------------|--------|------------|
| AAV gene therapy | Feasible | Serotype selection for neuronal tr

Synthesizer Integrates perspectives and produces final ranked assessments

Scientific Synthesis: CYP46A1 Overexpression Gene Therapy for Neurodegeneration

Dimension Scores

| Dimension | Score | Rationale |
|-----------|-------|-----------|
| Mechanistic Plausibility | 0.78 | Solid biological foundation (CYP46A1 is the rate-limiting enzyme for brain cholesterol elimination), multiple interconnected pathways (lipid raft remodeling, LXR activation, SREBP signaling), but relies on unproven assumption that modest cholesterol reductions will meaningfully shift amyloid pathology |
| Evidence Strength | 0.70 | Promising mouse model data (APP/PS1 and 3xTg-AD

Price History

0.250.500.75 created: post_process (2026-04-02T07:45)debate: market_dynamics (2026-04-02T07:58)score_update: post_process (2026-04-02T08:39)evidence: market_dynamics (2026-04-02T08:44)score_update: post_process (2026-04-02T09:33)debate: debate_engine (2026-04-02T10:27)evidence: evidence_update (2026-04-02T11:21)evidence: evidence_update (2026-04-02T12:15)score_update: market_dynamics (2026-04-02T13:10)evidence: market_dynamics (2026-04-02T13:56)debate: debate_engine (2026-04-02T14:04)debate: market_dynamics (2026-04-02T14:36)evidence: market_dynamics (2026-04-02T17:18)evidence: market_dynamics (2026-04-02T17:42)score_update: market_dynamics (2026-04-02T18:15)evidence: market_dynamics_seed (2026-04-02T18:16)score_update: market_dynamics (2026-04-02T18:45)debate: market_dynamics (2026-04-02T19:01)score_update: market_dynamics (2026-04-02T20:43)evidence: evidence_batch_update (2026-04-04T09:08)evidence: evidence_batch_update (2026-04-13T02:18)evidence: evidence_batch_update (2026-04-13T02:18) 1.00 0.00 2026-04-022026-04-122026-04-28 Market PriceScoreevidencedebate 219 events
7d Trend
Falling
7d Momentum
▼ 13.2%
Volatility
Medium
0.0209
Events (7d)
7
⚡ Price Movement Log Recent 15 events
Event Price Change Source Time
📄 New Evidence $0.489 ▲ 2.0% evidence_batch_update 2026-04-13 02:18
📄 New Evidence $0.479 ▲ 2.4% evidence_batch_update 2026-04-13 02:18
Recalibrated $0.468 ▼ 1.3% 2026-04-12 18:34
Recalibrated $0.474 ▼ 0.4% 2026-04-12 10:15
Recalibrated $0.476 ▼ 1.2% 2026-04-10 15:58
Recalibrated $0.481 ▲ 1.4% 2026-04-10 14:40
Recalibrated $0.475 ▼ 5.3% 2026-04-08 18:39
Recalibrated $0.501 ▲ 4.2% 2026-04-06 04:04
Recalibrated $0.481 ▼ 1.2% 2026-04-04 16:38
Recalibrated $0.487 ▼ 0.3% 2026-04-04 16:02
📄 New Evidence $0.488 ▲ 2.3% evidence_batch_update 2026-04-04 09:08
Recalibrated $0.477 ▼ 0.9% 2026-04-04 01:39
Recalibrated $0.481 ▼ 18.5% 2026-04-03 23:46
Recalibrated $0.590 ▲ 8.5% market_dynamics 2026-04-03 01:06
Recalibrated $0.544 ▲ 8.0% market_dynamics 2026-04-03 01:06

Clinical Trials (4) Relevance: 13%

2
Active
2
Completed
0
Total Enrolled
Phase II
Highest Phase
Fingolimod (sphingosine analog) in Alzheimer's Disease Phase II
Recruiting · NCT03636334
Desipramine Neuroprotection Study Phase II
Completed · NCT00076440
Amitriptyline Low-Dose for Neurodegeneration Phase II
Recruiting · NCT04524351
Plasma Ceramide Biomarkers in Cognitive Decline Observational
Completed · NCT03578848

📚 Cited Papers (36)

1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
Nutrient-induced insulin resistance in human skeletal muscle.
Current medicinal chemistry (2004) · PMID:15078172
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
5 figures
Figure 1
Figure 1
TLRs expression in PBMCs of HIV-1-infected subjects on cART PBMCs were collected from HIV-1-infected subjects ( n = 18) prior to (0 m) or 1 month (1 m), 3 months (3 m), and 6 mont...
pmc_api
Figure 2
Figure 2
IFN regulatory factor (IRF)-3/7/9 expression in PBMCs of HIV-1-infected subjects on cART PBMCs were collected from HIV-1-infected subjects ( n = 18) prior to (0 m) or 1 month (1 m...
pmc_api
3 figures
Fig. 1
Fig. 1
The structure of the neurovascular section. The neurovascular unit (NVU) comprises neurons, glial cells (astrocytes, microglia, oligodendrocytes), and vascular cells (endothelial c...
pmc_api
Fig. 2
Fig. 2
Summary of nanoparticle-based systems, non-invasive approaches, and targeted delivery (TD) in the brain. A The image illustrates seven key methods for overcoming the blood–brain ...
pmc_api
Nutrient-induced insulin resistance in human skeletal muscle.
Current medicinal chemistry (2004) · PMID:15078172
No extracted figures yet
No extracted figures yet
No extracted figures yet
Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons.
Proceedings of the National Academy of Sciences of the United States of America (2016) · PMID:27531958
No extracted figures yet
No extracted figures yet
No extracted figures yet
Health status of long-term sick leave and working female teachers in Germany: A cross-sectional study.
International journal of occupational medicine and environmental health (2018) · PMID:29063910
No extracted figures yet

📅 Citation Freshness Audit

Freshness score = exp(-age×ln2/5): halves every 5 years. Green >0.6, Amber 0.3–0.6, Red <0.3.

No citation freshness data yet. Export bibliography — run scripts/audit_citation_freshness.py to populate.

📓 Linked Notebooks (7)

📓 Lipid raft composition changes in synaptic neurodegeneration — Analysis Notebook
CI-generated notebook stub for analysis SDA-2026-04-01-gap-lipid-rafts-2026-04-01. Investigate how lipid raft composition (cholesterol metabolism, sphingolipids) changes in synaptic membranes during n …
📓 Lipid raft composition — Analysis Notebook
Comprehensive analysis notebook
📓 Lipid raft composition changes in synaptic neurodegeneration - Rich Analysis
Rich notebook with gene expression, pathway enrichment, and statistical analysis
📓 Lipid raft composition changes in synaptic neurodegeneration - Top 5 Rich Notebook
Rich notebook with gene expression, pathway enrichment, KG network, score heatmaps, and statistical analysis.
📓 Lipid raft composition changes in synaptic neurodegeneration — Rich Analysis
Enhanced notebook with gene expression, pathway enrichment, score heatmaps, and statistical analysis. Investigate how lipid raft composition (cholesterol metabolism, sphingolipids) changes in synaptic …
📓 Lipid raft composition changes in synaptic neurodegeneration -- Rich Analysis Notebook
Comprehensive analysis with gene expression plots, pathway enrichment, statistical tests, and debate highlights for: Lipid raft composition changes in synaptic neurodegeneration
📓 Lipid raft composition changes in synaptic neurodegeneration
Investigate how lipid raft composition (cholesterol metabolism, sphingolipids) changes in synaptic membranes during neurodegeneration and their mechanistic role in amyloid-beta processing and synapse …
→ Browse all notebooks

⚔ Arena Performance

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📊 Resource Economics & ROI

High Efficiency Resource Efficiency Score
0.82
58.5th percentile (776 hypotheses)
Tokens Used
6,242
KG Edges Generated
22
Citations Produced
23

Cost Ratios

Cost per KG Edge
35.07 tokens
Lower is better (baseline: 2000)
Cost per Citation
346.78 tokens
Lower is better (baseline: 1000)
Cost per Score Point
9876.58 tokens
Tokens / composite_score

Score Impact

Efficiency Boost to Composite
+0.082
10% weight of efficiency score
Adjusted Composite
0.773

How Economics Pricing Works

Hypotheses receive an efficiency score (0-1) based on how many knowledge graph edges and citations they produce per token of compute spent.

High-efficiency hypotheses (score >= 0.8) get a price premium in the market, pulling their price toward $0.580.

Low-efficiency hypotheses (score < 0.6) receive a discount, pulling their price toward $0.420.

Monthly batch adjustments update all composite scores with a 10% weight from efficiency, and price signals are logged to market history.

Efficiency Price Signals

Date Signal Price Score
2026-04-16T20:00$0.4820.580

📋 Reviews View all →

Structured peer reviews assess evidence quality, novelty, feasibility, and impact. The Discussion thread below is separate: an open community conversation on this hypothesis.

💬 Discussion

No DepMap CRISPR Chronos data found for SGMS1/SGMS2.

Run python3 scripts/backfill_hypothesis_depmap.py to populate.

No curated ClinVar variants loaded for this hypothesis.

Run scripts/backfill_clinvar_variants.py to fetch P/LP/VUS variants.

🔍 Search ClinVar for SGMS1/SGMS2 →
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⚖️ Governance History

No governance decisions recorded for this hypothesis.

Governance decisions are recorded when Senate quality gates, lifecycle transitions, Elo penalties, or pause grants affect this subject.

Browse all governance decisions →

Wiki Pages

ANG — AngiogeningeneANG ProteinproteinSynaptic Biomarkers in NeurodegenerationbiomarkerGlutamate - Excitotoxicity and Neurodegeneration BbiomarkerNeuroimaging Biomarkers for NeurodegenerationbiomarkerMetabolomic Biomarkers in NeurodegenerationbiomarkerCSF Neurofilament Light Chain (NfL) in NeurodegenebiomarkerDNA Methylation Biomarkers in NeurodegenerationbiomarkerExosomal Biomarkers in NeurodegenerationbiomarkerExosomal miR-155 in NeurodegenerationbiomarkerMDS 2026 — Fluid Biomarker Advances in NeurodegeneeventLiquid Biopsy in NeurodegenerationbiomarkerCell-Free DNA Biomarkers in NeurodegenerationbiomarkerBlood-Based Biomarkers for NeurodegenerationbiomarkerIL-6 (Interleukin-6) in Neurodegenerationbiomarker

KG Entities (129)

24S-hydroxycholesterol24S-hydroxycholesterol (low concentratioAAV gene therapyAAV-mediated CYP46A1 deliveryAAV-mediated gene therapyABCA1ABCA1/LDLR/SREBF2ADAM10AKTAPPAPP_processingAcid sphingomyelinase / ceramide signaliAlzheimer's diseaseAlzheimer_diseaseBACE1BACE1_clusteringBAXBeta-secretase / amyloidogenic pathwayCAV1CERS2

Linked Experiments (2)

Oligodendrocyte-Myelin Dysfunction Validation in Parkinson's Diseaseclinical | tests | 0.40Validation: Membrane-Nucleation in iPSC Neuronsvalidation | tests | 0.40

Related Hypotheses

Gut Microbiome Remodeling to Prevent Systemic NLRP3 Priming in Neurodegeneration
Score: 0.907 | neurodegeneration
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Score: 0.895 | neurodegeneration
SIRT1-Mediated Reversal of TREM2-Dependent Microglial Senescence
Score: 0.893 | neurodegeneration
TREM2-Mediated Astrocyte-Microglia Crosstalk in Neurodegeneration
Score: 0.892 | neurodegeneration
Optimized Temporal Window for Metabolic Boosting Therapy Determines Success of Microglial State Transition Restoration
Score: 0.887 | neurodegeneration

Estimated Development

Estimated Cost
$0
Timeline
2.2 years

🧪 Falsifiable Predictions (3)

3 total 0 confirmed 0 falsified
If hypothesis is true, intervention provide maximal sphingomyelin recovery
pending conf: 0.70
Expected outcome: provide maximal sphingomyelin recovery
Falsified by: Intervention fails to provide maximal sphingomyelin recovery
If hypothesis is true, intervention be tested in early AD with ceramide reduction as the primary endpoint
pending conf: 0.70
Expected outcome: be tested in early AD with ceramide reduction as the primary endpoint
Falsified by: Intervention fails to be tested in early AD with ceramide reduction as the primary endpoint
If hypothesis is true, intervention increase sphingomyelin synthesis globally, potentially altering membrane properties in non-target tissues
pending conf: 0.70
Expected outcome: increase sphingomyelin synthesis globally, potentially altering membrane properties in non-target tissues
Falsified by: Intervention fails to increase sphingomyelin synthesis globally, potentially altering membrane properties in non-target tissues

Knowledge Subgraph (200 edges)

activates (5)

BACE1_clusteringamyloid_beta_productionsphingomyelin_synthesismembrane_fluidity24S-hydroxycholesterolLRX activation24S-hydroxycholesterolLXR activationCYP46A1 overexpressionLXR signaling

associated with (16)

cholesterol_effluxlipid_raft_compositionFLOT1lipid_raft_scaffoldingABCA1neurodegenerationSREBF2neurodegenerationCYP46A1neurodegeneration
▸ Show 11 more

biomarker for (2)

elevated 24S-hydroxycholesterolAlzheimer's diseaseelevated 24S-hydroxycholesterolHuntington's disease

catalyzes (1)

CYP46A1brain cholesterol elimination

causal extracted (1)

sess_ext_h-2600483e_20260428_051452processed

causes (7)

ceramide_biosynthesislipid_raft_dysfunctionCYP46A124S-hydroxycholesterol24S-hydroxycholesterolneurotoxicityCYP46A1 overexpressionamyloid-beta reductionAAV-mediated CYP46A1 deliverytherapeutic window achievement
▸ Show 2 more

co associated with (14)

ABCA1/LDLR/SREBF2FLOT1ABCA1/LDLR/SREBF2SGMS1/SGMS2ABCA1/LDLR/SREBF2BACE1BACE1FLOT1BACE1SGMS1/SGMS2
▸ Show 9 more

co discussed (102)

BACE1NLRP3AKTBACE1BAXJNKADAM10APPADAM10BACE1
▸ Show 97 more
BACE1TAUFLOT1SREBF2FLOT1CYP46A1FLOT1SGMS2FLOT1ABCA1FLOT1BACE1FLOT1ST3GAL2FLOT1ST8SIA1FLOT1LDLRFLOT1SMPD1FLOT1SGMS1SREBF2CYP46A1SREBF2SGMS2SREBF2ABCA1SREBF2BACE1SREBF2ST3GAL2SREBF2ST8SIA1SREBF2LDLRSREBF2SMPD1SREBF2SGMS1CYP46A1SGMS2CYP46A1ABCA1CYP46A1BACE1CYP46A1ST3GAL2CYP46A1ST8SIA1CYP46A1LDLRCYP46A1SMPD1CYP46A1SGMS1SGMS2ABCA1SGMS2BACE1SGMS2ST3GAL2SGMS2ST8SIA1SGMS2LDLRSGMS2SMPD1SGMS2SGMS1ABCA1BACE1ABCA1ST3GAL2ABCA1ST8SIA1ABCA1SMPD1ABCA1SGMS1BACE1ST3GAL2BACE1ST8SIA1BACE1LDLRBACE1SMPD1BACE1SGMS1ST3GAL2ST8SIA1ST3GAL2LDLRST3GAL2SMPD1ST3GAL2SGMS1ST8SIA1LDLRST8SIA1SMPD1ST8SIA1SGMS1LDLRSMPD1LDLRSGMS1SMPD1SGMS1ST8SIA1BACE1ST8SIA1CYP46A1ST8SIA1ST3GAL2ST8SIA1FLOT1ST8SIA1ABCA1ST8SIA1SGMS2ST8SIA1SREBF2LDLRBACE1LDLRCYP46A1LDLRST3GAL2LDLRFLOT1LDLRABCA1LDLRSGMS2LDLRSREBF2BACE1FLOT1BACE1ABCA1BACE1SGMS2BACE1SREBF2CYP46A1FLOT1CYP46A1SREBF2ST3GAL2FLOT1ST3GAL2ABCA1ST3GAL2SGMS2ST3GAL2SREBF2SGMS1FLOT1SGMS1ABCA1SGMS1SMPD1SGMS1SREBF2ABCA1SGMS2ABCA1SREBF2SGMS2SREBF2SMPD1SREBF2SMPD1LDLRSMPD1ST3GAL2SMPD1ST8SIA1SMPD1ABCA1SMPD1SGMS2SMPD1CYP46A1LDLRST8SIA1ST3GAL2CYP46A1ABCA1CYP46A1SGMS2CYP46A1

interacts with (10)

ABCA1LDLRABCA1SREBF2LDLRABCA1LDLRSREBF2SREBF2ABCA1
▸ Show 5 more

involved in (6)

ABCA1/LDLR/SREBF2cholesterol_efflux___lipid_transportCYP46A1cholesterol_24_hydroxylase___brain_cholesterol_turnoverST3GAL2/ST8SIA1sphingolipid___ceramide_signalingSGMS1/SGMS2sphingolipid___ceramide_signalingFLOT1lipid_raft_membrane_organization
▸ Show 1 more

modifies (3)

SMPD1ceramide_biosynthesisSGMS1sphingomyelin_synthesisST3GAL2ganglioside_biosynthesis

modulates (5)

24S-hydroxycholesterolneuronal functioncholesterol reductionamyloid pathologyCYP46A1SREBP signaling24S-hydroxycholesterolSREBP signalingAAV gene therapyCYP46A1 delivery

participates in (11)

SMPD1Acid sphingomyelinase / ceramide signalingABCA1Cholesterol efflux / lipid transportLDLRCholesterol efflux / lipid transportSREBF2Cholesterol efflux / lipid transportCYP46A1Cholesterol 24-hydroxylase / brain cholesterol turnover
▸ Show 6 more

prevents (3)

24S-hydroxycholesterolamyloid pathologycholesterol reductionamyloid-beta pathologylipid raft remodelingamyloid-beta accumulation

protective against (1)

24S-hydroxycholesterolneuronal viability

reduces (1)

CYP46A1amyloid-beta accumulation

regulates (6)

CYP46A1cholesterol_metabolismcholesterol_metabolismBACE1_clusteringABCA1cholesterol_effluxganglioside_biosynthesissynaptic_membrane_organizationCYP46A1brain cholesterol elimination
▸ Show 1 more

targets (3)

h-9d29bfe5ABCA1/LDLR/SREBF2h-fdb07848SGMS1/SGMS2h-12599989ST3GAL2/ST8SIA1

therapeutic target for (3)

CYP46A1 overexpressionAlzheimer's diseaseCYP46A1 overexpressionHuntington's diseaseCYP46A1Alzheimer's disease

Mechanism Pathway for SGMS1/SGMS2

Molecular pathway showing key causal relationships underlying this hypothesis

graph TD
    h_fdb07848["h-fdb07848"] -->|targets| SGMS1_SGMS2["SGMS1/SGMS2"]
    SGMS1_SGMS2_1["SGMS1/SGMS2"] -->|associated with| neurodegeneration["neurodegeneration"]
    ABCA1_LDLR_SREBF2["ABCA1/LDLR/SREBF2"] -->|co associated with| SGMS1_SGMS2_2["SGMS1/SGMS2"]
    BACE1["BACE1"] -->|co associated with| SGMS1_SGMS2_3["SGMS1/SGMS2"]
    CYP46A1["CYP46A1"] -->|co associated with| SGMS1_SGMS2_4["SGMS1/SGMS2"]
    FLOT1["FLOT1"] -->|co associated with| SGMS1_SGMS2_5["SGMS1/SGMS2"]
    SGMS1_SGMS2_6["SGMS1/SGMS2"] -->|co associated with| ST3GAL2_ST8SIA1["ST3GAL2/ST8SIA1"]
    SGMS1_SGMS2_7["SGMS1/SGMS2"] -->|involved in| sphingolipid___ceramide_s["sphingolipid___ceramide_signaling"]
    style h_fdb07848 fill:#4fc3f7,stroke:#333,color:#000
    style SGMS1_SGMS2 fill:#ce93d8,stroke:#333,color:#000
    style SGMS1_SGMS2_1 fill:#ce93d8,stroke:#333,color:#000
    style neurodegeneration fill:#ef5350,stroke:#333,color:#000
    style ABCA1_LDLR_SREBF2 fill:#ce93d8,stroke:#333,color:#000
    style SGMS1_SGMS2_2 fill:#ce93d8,stroke:#333,color:#000
    style BACE1 fill:#ce93d8,stroke:#333,color:#000
    style SGMS1_SGMS2_3 fill:#ce93d8,stroke:#333,color:#000
    style CYP46A1 fill:#ce93d8,stroke:#333,color:#000
    style SGMS1_SGMS2_4 fill:#ce93d8,stroke:#333,color:#000
    style FLOT1 fill:#ce93d8,stroke:#333,color:#000
    style SGMS1_SGMS2_5 fill:#ce93d8,stroke:#333,color:#000
    style SGMS1_SGMS2_6 fill:#ce93d8,stroke:#333,color:#000
    style ST3GAL2_ST8SIA1 fill:#ce93d8,stroke:#333,color:#000
    style SGMS1_SGMS2_7 fill:#ce93d8,stroke:#333,color:#000
    style sphingolipid___ceramide_s fill:#81c784,stroke:#333,color:#000

Predicted Protein Structure

🔮 SGMS1 — AlphaFold Prediction Q86SK2 Click to expand 3D viewer

AI-predicted structure from AlphaFold | Powered by Mol* | Rotate: click+drag | Zoom: scroll | Reset: right-click

Source Analysis

Lipid raft composition changes in synaptic neurodegeneration

neurodegeneration | 2026-04-01 | completed

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Same Analysis (5)

Senescent Cell ASM-Complement Cascade Intervention
Score: 0.85 · SMPD1
Neutral Sphingomyelinase-2 Inhibition for Synaptic Protection in Neuro
Score: 0.84 · SMPD3
Selective Acid Sphingomyelinase Modulation Therapy
Score: 0.75 · SMPD1
Selective Neutral Sphingomyelinase-2 Inhibition Therapy
Score: 0.73 · SMPD3
CYP46A1 Overexpression Gene Therapy
Score: 0.73 · CYP46A1
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