biomarker 1,092 words KG: HMGB1
Contents

High Mobility Group Box 1 (HMGB1) - Biomarker

🔬 Protein Info
Gene SymbolHMGB1
Full NameHigh Mobility Group Box 1
Chromosome13q12.3
Functionis a gene on chromosome 13q12.
Primary ExpressionUbiquitous; enriched in neurons, microglia, astrocytes
Molecular Weight25 kDa
Amino Acids215 aa
Exons5
PathwaysAdaptive Immunity, Akt, Autophagy Machinery, Ferroptosis, Mapk
UniProt IDP09429
NCBI Gene ID3146
Ensembl IDENSG00000189403
OMIM163905
GeneCardsHMGB1
Human Protein AtlasHMGB1
Associated DiseasesAging, Als, Alzheimer, Anxiety-like behavior, cancer
Known Drugs/CompoundsBox-A, curcumin, Glycyrrhizic Acid, Omega-3 Polyunsaturated Fatty Acids, rapamycin, RAPAMYCIN
InteractionsABCA1, ABCG1, ACHE, Actin, AD, Adiponectin
KG Connections1381 knowledge graph edges
DatabasesGeneCardsHPASTRING

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Knowledge Graph

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🌐 Cross-references

Wikipedia

Related Hypotheses (8)

Senescent Microglia Resolution via Maresins-Senolytics Combi
Score: 0.79
Selective TLR4 Modulation to Prevent Gut-Derived Neuroinflam
Score: 0.79
Cell-Type Specific TREM2 Upregulation in DAM Microglia
Score: 0.76
GFAP-Positive Reactive Astrocyte Subtype Delineation
Score: 0.75
Orexin-Microglia Modulation Therapy
Score: 0.71
Microglial Efferocytosis Enhancement via GPR32 Superagonists
Score: 0.70
Metabolic Reprogramming via Microglial Glycolysis Inhibition
Score: 0.67
Enteric Nervous System Prion-Like Propagation Blockade
Score: 0.48

Related Analyses (3)

What are the mechanisms by which gut microbiome dysbiosis in
neurodegeneration · completed
SEA-AD Gene Expression Profiling — Allen Brain Cell Atlas
neurodegeneration · completed
Digital biomarkers and AI-driven early detection of neurodeg
neurodegeneration · archived

Related Experiments (5)

ER-Golgi Secretory Pathway Dysfunction in PD - Experiment De
clinical · proposed · Score: 0.40
Macroautophagy Dysfunction in PD - Experiment Design
clinical · proposed · Score: 0.40
TLR expression analysis in Parkinson's disease patients
clinical · proposed · Score: 0.85
TLR4 Activation Assay with NETs and Anti-CarP Antibodies
exploratory · proposed · Score: 0.85
TLR expression in α-synuclein overexpressing mice
validation · proposed · Score: 0.80

Knowledge Graph (12 edges)

HMGB1 activates NET
ATF6 interacts_with HMGB1
OPTN interacts_with HMGB1
CASP3 interacts_with HMGB1
AKT1 interacts_with HMGB1
CALCOCO2 interacts_with HMGB1
CGAS interacts_with HMGB1
CFTR interacts_with HMGB1
SQSTM1 interacts_with HMGB1
RPS6KB1 interacts_with HMGB1

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