protein 3,352 words KG: TARDBP
Contents

TARDBP Protein (TDP-43)

🔬 Protein Info
Gene SymbolTARDBP
Chromosome1p36
Protein TypeTranscription Factor
Target ClassTranscription Factor
FunctionRNA-binding and transcription regulation, challenging for small molecule targeting
Mechanism of ActionRNA-binding and transcription regulation, challenging for small molecule targeting
Subcellular Localization</b></td><td>Nucleus (healthy), Cytoplasm (disease)</td></tr>
DruggabilityLow (0.43)
Clinical StagePhase III
Molecular Weight43 kDa
Amino Acids4477 aa
PathwaysApoptosis, Autophagy, Immune Response, Oxidative Stress, Tdp-43
UniProt IDA0A087WYY0
GeneCardsTARDBP
Human Protein AtlasTARDBP
Associated DiseasesAD, ALI, Als, ALS-FTD, Alzheimer
Known Drugs/Compoundsrapamycin, RAPAMYCIN, Transcribed Rnas
InteractionsABCA1, AD, AIF1, ALS, ALS-CAUSING MUTATIONS, AMPK
SciDEX TargetView Target Profile (7 clinical trials)
SciDEX HypothesesSTMN2 Cryptic Exon Inclusion is the Earliest Loss-
Cross-Seeding Prevention Strategy
Glial Neuroinflammatory Amplification by TDP-43 Pa (+7 more)
KG Connections1210 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING

No AI portrait yet

Knowledge Graph

Agent Input

💡 Improve this page

🌐 Cross-references

UniProtWikipedia

Related Hypotheses (42)

Cross-Seeding Prevention Strategy
Score: 0.69
Glycine-Rich Domain Competitive Inhibition
Score: 0.64
Cryptic Exon Silencing Restoration
Score: 0.53
RNA-Binding Competition Therapy for TDP-43 Cross-Seeding
Score: 0.47
Stress Granule Phase Separation Modulators
Score: 0.72
Arginine Methylation Enhancement Therapy
Score: 0.65
Low Complexity Domain Cross-Linking Inhibition
Score: 0.62
Hippocampal CA3-CA1 circuit rescue via neurogenesis and syna
Score: 0.82
Selective APOE4 Degradation via Proteolysis Targeting Chimer
Score: 0.79
Competitive APOE4 Domain Stabilization Peptides
Score: 0.78
APOE4 Allosteric Rescue via Small Molecule Chaperones
Score: 0.76
Cell-Type Specific TREM2 Upregulation in DAM Microglia
Score: 0.76
Targeted APOE4-to-APOE3 Base Editing Therapy
Score: 0.76
Transcriptional Autophagy-Lysosome Coupling
Score: 0.76
APOE Isoform Expression Across Glial Subtypes
Score: 0.74
Phase-Separated Organelle Targeting
Score: 0.73
Interfacial Lipid Mimetics to Disrupt Domain Interaction
Score: 0.72
Lysosomal Calcium Channel Modulation Therapy
Score: 0.70
Perforant Path Presynaptic Terminal Protection Strategy
Score: 0.70
Lysosomal Positioning Dynamics Modulation
Score: 0.69
pg 1/3Next →

Related Analyses (16)

Protein aggregation cross-seeding across neurodegenerative d
neurodegeneration · completed
RNA binding protein dysregulation across ALS FTD AD
neurodegeneration · archived
What are the mechanisms by which gut microbiome dysbiosis in
neurodegeneration · completed
CRISPR-based therapeutic approaches for neurodegenerative di
neurodegeneration · completed
Synaptic pruning by microglia in early AD
neurodegeneration · archived

Related Experiments (15)

TDP-43 mitochondrial invasion and mtDNA release in iPSC moto
exploratory · proposed · Score: 0.90
TDP-43 mutant mouse model cGAS/STING pathway analysis
validation · proposed · Score: 0.90
TDP-43 mitochondrial invasion and DNA release via mPTP
exploratory · proposed · Score: 0.90
cGAS/STING pathway validation in TDP-43 mutant mice
validation · proposed · Score: 0.85
TDP-43 pathology prevalence and distribution in AD cases
exploratory · proposed · Score: 0.80

See Also (15)

ALDH2 — Aldehyde Dehydrogenase 2
gene · KG edge: regulates
ABCA1 - ATP-Binding Cassette Transporter A1
gene · KG edge: regulates
Packard Center for ALS Research
institution · KG edge: activates
ALS2 (Alsin)
gene · KG edge: associated_with
UPenn Observational Research Repository (NCT04715399)
clinical · Pages share 4 hypotheses

Knowledge Graph (12 edges)

TARDBP associated_with neurodegeneration
TGM2 co_discussed TARDBP
TARDBP co_discussed PRMT1
TARDBP co_discussed PARP1
TARDBP co_discussed HSPA1A
TARDBP co_discussed G3BP1
TARDBP co_discussed SRPK1
SETX co_discussed TARDBP
TARDBP co_discussed HNRNPA2B1
TARDBP co_discussed NPM1

Community Feedback

0 0 upvotes · 0 downvotes
💬 0 comments ⚠ 0 flags ✏ 0 edit suggestions

No comments yet. Be the first to comment!

View all feedback (JSON)

💬 Discussion (Talk page)

Loading comments...
Public annotations (0)Annotate on Hypothes.is →
No public annotations yet.