gene 544 words KG: CDK9
Contents

CDK9 Gene

🧬 Gene Info
Gene SymbolCDK9
AliasesCyclin-Dependent Kinase 9
Protein TypeSerine/Threonine Kinase
FunctionThe CDK9 gene encodes Cyclin-Dependent Kinase 9, a 372-amino acid serine/threonine kinase
Primary Expressionneurons throughout the cortex, hippocampus, and basal ganglia
Subcellular Localizations. CDK9 activity is regulated by cellular stress, growth factors, and signaling pathways
Molecular Weight43 kDa
Amino Acids372 aa
Ensembl IDENSG00000136807
GeneCardsCDK9
Human Protein AtlasCDK9
Transcriptional ElongationCatalytic subunit of P-TEFb; phosphorylates RNA Pol II CTD Ser2, NELF, and DSIF to enable transcription elongation[@zhou2013].
Gene Expression ControlRegulates expression of immediate-early genes, heat shock proteins, and anti-apoptotic genes.
Neuronal SurvivalProtects neurons from oxidative stress and excitotoxicity through regulation of neurotrophic factor expression.
Mitochondrial FunctionRegulates expression of mitochondrial genes and proteins involved in energy metabolism.
Associated Diseasesneurodegeneration
InteractionsAND, APOPTOSIS, BRD4, DNA, DYRK1A, Fus
KG Connections40 knowledge graph edges
DatabasesGeneCardsUniProtNCBI GeneHPASTRING

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Knowledge Graph

Related Hypotheses (6)

Chromatin Accessibility Restoration via BRD4 Modulation
Score: 0.77
CYP46A1 Overexpression Gene Therapy
Score: 0.92
Astrocytic Lipoxin A4 Pathway Restoration via ALOX15 Gene Th
Score: 0.69
Chaperone-Mediated APOE4 Refolding Enhancement
Score: 0.68
FOXO3-Longevity Pathway Epigenetic Reprogramming
Score: 0.67

Related Analyses (5)

Neuroinflammation resolution mechanisms and pro-resolving me
neurodegeneration · archived
Lipid raft composition changes in synaptic neurodegeneration
neurodegeneration · completed
Epigenetic clocks and biological aging in neurodegeneration
neurodegeneration · archived
Epigenetic reprogramming in aging neurons
neurodegeneration · archived
Circuit-level neural dynamics in neurodegeneration
neuroscience · archived

Related Experiments (4)

Factor depletion effects on DDR focus formation in vivo
exploratory · proposed · Score: 0.90
DDR factor depletion and focus formation analysis
exploratory · proposed · Score: 0.90
DSB-induced promoter assembly and RNA polymerase II recruitm
exploratory · proposed · Score: 0.85
DSB-induced promoter assembly and RNA polymerase II recruitm
exploratory · proposed · Score: 0.80

See Also (7)

Apoptosis in Neurodegeneration
entity · KG edge: inhibits
FUS (Redirect)
redirect · KG edge: inhibits
DNA Damage Repair Deficiency Validation Study in Parkin
experiment · KG edge: activates
Genes
index · KG edge: inhibits
GAIN Gene - GABA-A Receptor Associated Protein Like 2
gene · KG edge: inhibits

Knowledge Graph (12 edges)

MYC regulates CDK9
CDK9 regulates TBX3
CDK9 regulates TCF3
GAIN inhibits CDK9
CDK9 inhibits GAIN
BRD4 activates CDK9
CDK9 mediates DNA damage response
CDK9 interacts_with POLR2A
CDK9 inhibits DYRK1A
CDK9 inhibits SF3B1

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