protein

ALK

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about ALK: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

21Connections
25Hypotheses
0Analyses
17Outgoing
4Incoming
6Experiments
0Debates

Summary

Page for ALK Protein

View on Wiki →

No AI portrait yet

🔬 Protein Info
Gene SymbolALK
Molecular Weight200 kDa
PathwaysPI3K, MAPK
GeneCardsALK
Human Protein AtlasALK
Associated DiseasesALS
InteractionsEGFR, IRF2BP2, KRAS, YAP
KG Connections18 knowledge graph edges
DatabasesGeneCardsUniProtNCBI GeneHPASTRING

Wiki Pages (3)

Knowledge base pages for this entity

BMPR1A (ALK3) Protein

protein · 1550 words

ALKBH5 Protein (AlkB Homolog 5)

protein · 741 words

ALK Protein

protein · 734 words

Pathway Diagram

graph TD
    ALK["ALK"]
    NEUROBLASTOMA["NEUROBLASTOMA"]
    ALK -->|"activates"| NEUROBLASTOMA
    TUMOR_CELLS["TUMOR CELLS"]
    TUMOR_CELLS -->|"regulates"| ALK
    IRF2BP2["IRF2BP2"]
    ALK -->|"activates"| IRF2BP2
    ALK -->|"regulates"| IRF2BP2
    APC["APC"]
    ALK -->|"associated with"| APC
    ARID1A["ARID1A"]
    ALK -->|"associated with"| ARID1A
    DNA["DNA"]
    ALK -->|"associated with"| DNA
    KRAS["KRAS"]
    ALK -->|"associated with"| KRAS
    TP53["TP53"]
    ALK -->|"associated with"| TP53
    NEUROBLASTOMA -->|"associated with"| ALK
    style ALK fill:#0d47a1,stroke:#42a5f5,stroke-width:2px,color:#fff

Outgoing (17)

TargetRelationTypeStr
h-5d753df0targeted_byhypothesis1.00
NEUROBLASTOMAactivatesdisease0.65
EGFRtargetsgene0.60
KRAStargetsgene0.60
cancertargetsdisease0.60

Incoming (4)

SourceRelationTypeStr
h-5d753df0targetshypothesis1.00
34819673is activated bypaper0.90
TUMOR CELLSregulatescell_type0.65
NEUROBLASTOMAassociated_withdisease0.45

Targeting Hypotheses (25)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
TREM2-Mediated Astrocyte-Microglia Crosstalk in Neurodegener 0.892 neurodegeneration Gene expression changes in aging mouse b
TREM2-CSF1R Cross-Talk in Microglial Metabolic Reprogramming 0.748 neurodegeneration Gene expression changes in aging mouse b
TREM2 Crosstalk and Synergistic Activation of Phagocytic Tra 0.740 neuroinflammation What molecular mechanisms mediate SPP1-i
TREM2-Mediated Astrocyte-Microglia Cross-Talk in Neurodegene 0.708 neurodegeneration Gene expression changes in aging mouse b
TREM2-ASM Crosstalk in Microglial Lysosomal Senescence 0.705 neurodegeneration Gene expression changes in aging mouse b
Mitochondrial-Nuclear Epigenetic Cross-Talk Restoration 0.701 neurodegeneration Epigenetic reprogramming in aging neuron
TREM2-Dependent Astrocyte-Microglia Cross-talk in Neurodegen 0.680 neurodegeneration TREM2 in Alzheimer's Disease: Mechanisms
Vascular Cell Type Crosstalk Driving Blood-Brain Barrier Bre 0.662 neurodegeneration Methodology challenge: dataset 'Allen Br
CX3CR1 Promoter Methylation Disrupts Neuron-Microglia Cross- 0.649 developmental neurobiology Do perinatal immune challenges create pe
TREM2-Mediated Astrocyte-Microglia Cross-Talk in Neurodegene 0.642 neurodegeneration Gene expression changes in aging mouse b
TREM2-Mediated Astrocyte-Microglia Cross-Talk in Neurodegene 0.625 neurodegeneration Gene expression changes in aging mouse b
Domain boundary cross-talk hypothesis 0.600 neurodegeneration View
TREM2-Mediated Oligodendrocyte-Microglia Cross-talk in White 0.600 neurodegeneration Gene expression changes in aging mouse b
Cardiovascular-Neuroinflammation Crosstalk Interruption 0.587 Alzheimer's disease Neuroinflammation and microglial priming
Fractalkine Axis Amplification via CX3CR1 Positive Allosteri 0.563 neurodegeneration Synaptic pruning by microglia in early A
Soluble CX3CL1 cleavage by ADAM proteases disengages fractal 0.540 neurodegeneration Synaptic pruning by microglia in neurode
NAC + Ferrostatin-1 Combination for Peroxynitrite-Ferroptosi 0.530 neurodegeneration Can ferroptosis inhibitors prevent BBB d
Closed-loop neuromodulation-inspired cytokine axis suppressi 0.530 cell biology -
Tripartite Synapse Cell Type-Nonautonomous Crosstalk: Coordi 0.510 neurodegeneration Cell type vulnerability debate in Alzhei
C1Q-Glia Cross-Talk in Vascular Dementia Pathogenesis 0.470 neuroinflammation What are the specific molecular mechanis
CX3CL1 Mimetic Peptide to Disrupt Fractalkine Signaling Dysr 0.459 immunomics Systemic immune profiling in neurodegene
Selective OGA Inhibition as 'Tau Stabilization' Strategy Wit 0.458 neurodegeneration Which tau PTMs are both disease-specific
C1q Inhibition Prevents Synaptic Mitochondrial Dysfunction v 0.455 neurodegeneration Why does PRKN-mediated mitophagy, typica
TREM2-Dependent Astrocyte-Microglia Cross-talk in Neuroinfla 0.380 neurodegeneration Spatial Transcriptomics Analysis of Alzh
C1q Binding Analysis Across ALK Inhibitor Chemical Series Wo 0.115 molecular biology Does Alectinib truly bind C1q directly w

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Experiments (6)

Experimental studies targeting or related to this entity

ExperimentTypeDiseaseScoreFeasibilityModelStatusEst. Cost
TREM2 Agonist Antibody Rescue of Astrocyte-Microglia Signalling in 5xF in_vivo Alzheimer's disease 0.794 0.72 5xFAD transgenic mice (n=15/gr proposed $85,000
Exercise-BDNF-Mitophagy Biomarker Study in PD clinical Parkinson's Disease 0.400 0.50 human proposed $6,550,000
Lifestyle Intervention Mechanisms in Alzheimer's Disease validation Alzheimer's Disease 0.400 0.50 mouse proposed $430,000
MLCS Quantification in Parkinson's Disease validation Parkinson's Disease 0.400 0.50 human proposed $2,730,000
Sirtuin Dysfunction Validation in Parkinson's Disease clinical Parkinson's Disease 0.400 0.50 human proposed $6,550,000
Sirtuin Pathway Dysfunction Validation in Parkinson's Disease clinical Parkinson's Disease 0.400 0.50 human proposed $6,550,000

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
Human and mouse single-nucleus transcriptomics reveal TREM2-dependent and TREM2- [PMID:31932797] Zhou Y, Song WM, Andhey PS, Swain A, Lev Nat Med 2020 1
Homoplantaginin ameliorates osteoarthritis by activating Sirt3/PINK1/Parkin sign [PMID:41720004] Zhang H, Xiao J, Yi Y, Chen B, Lv W et a Phytomedicine 2026 0
Kakkalide promotes spinal cord injury repair by regulating microglial M2 polariz [PMID:41720005] You T, Dai B, Ding X, He Z, Peng J et al Phytomedicine 2026 0
Enhancing TREM2 expression activates microglia and modestly mitigates tau pathol [PMID:40122810] ["Chen Kai", "Li Fuyao", "Zhang Shuwen", Journal of neuroinflammation 2025 0
Emerging Molecular Targets in Neurodegenerative Disorders: New Avenues for Thera [PMID:40922457] ["Eroglu E", "Harmanci N"] Basic & clinical pharmacology 2025 0
Microglia, Trem2, and Neurodegeneration. [PMID:38769824] Shi Q, Gutierrez RA, Bhat MA Neuroscientist 2025 0
Microglia, Trem2, and Neurodegeneration. [PMID:38769824] Shi Q, Gutierrez RA, Bhat MA The Neuroscientist : a review 2025 0
Mitochondrial dysfunction and aging: multidimensional mechanisms and therapeutic [PMID:40634825] Wei P, Zhang X, Yan C, Sun S, Chen Z, Li Biogerontology 2025 0
Enhancing TREM2 expression activates microglia and modestly mitigates tau pathol [PMID:40122810] ["Chen Kai", "Li Fuyao", "Zhang Shuwen", Journal of neuroinflammation 2025 0
Bridging gap in the treatment of Alzheimer's disease via postbiotics: Current pr [PMID:39952328] ["Bashir B", "Gulati M", "Vishwas S", "G Ageing research reviews 2025 0
Serine synthesis sustains macrophage IL-1β production via NAD+-dependent protein [PMID:38266638] Wang C, Chen Q, Chen S, Fan L, Gan Z, Zh Molecular cell 2024 0
SIRT3-Mediated Deacetylation of SDHA Rescues Mitochondrial Bioenergetics Contrib [PMID:38087172] ["Shen Y", "Wang X", "Nan N", "Fu X", "Z Molecular neurobiology 2024 0
SIRT3: A potential therapeutic target for liver fibrosis. [PMID:38561088] ["Ning Y", "Dou X", "Wang Z", "Shi K", " Pharmacology & therapeutics 2024 0
The role of microglial TREM2 in development: A path toward neurodegeneration? [PMID:38837837] ["Matteoli Michela"] Glia 2024 0
TREM2 receptor protects against complement-mediated synaptic loss by binding to [PMID:37442133] Zhong L, Sheng X, Wang W, Li Y, Zhuo R, Immunity 2023 0
Sirtuin family in autoimmune diseases. [PMID:37483618] Tao Z, Jin Z, Wu J, Cai G, Yu X Frontiers in immunology 2023 0
Mitochondrial sirtuins, metabolism, and aging. [PMID:34856390] Ji Z, Liu GH, Qu J Journal of genetics and genomi 2022 0
Understanding the Role of Histone Deacetylase and their Inhibitors in Neurodegen [PMID:34151764] Kumar V, Kundu S, Singh A, Singh S Curr Neuropharmacol 2022 0
Understanding the Role of Histone Deacetylase and their Inhibitors in Neurodegen [PMID:34151764] Kumar V, Kundu S, Singh A, Singh S Current neuropharmacology 2022 0
FGF21-Sirtuin 3 Axis Confers the Protective Effects of Exercise Against Diabetic [PMID:36134579] Jin L, Geng L, Ying L, Shu L, Ye K, Yang Circulation 2022 0

Debates (0)

Multi-agent debates referencing this entity

No debates reference this entity

Related Research

Hypotheses and analyses mentioning ALK in their description or question text

Mitochondrial-Nuclear Epigenetic Cross-Talk Restoration

Score: 0.701 · neurodegeneration · 2026-04-02

## Mechanistic Overview Mitochondrial-Nuclear Epigenetic Cross-Talk Restoration starts from the claim that modulating SI

TREM2-Dependent Astrocyte-Microglia Cross-talk in Neurodegeneration

Score: 0.680 · neurodegeneration · 2026-04-12

## Mechanistic Overview TREM2-Dependent Astrocyte-Microglia Cross-talk in Neurodegeneration starts from the claim that m

Vascular Cell Type Crosstalk Driving Blood-Brain Barrier Breakdown

Score: 0.662 · neurodegeneration · 2026-04-28

Pericyte-endothelial cross-talk failure leads to MMP9-mediated BBB disruption and tau propagation. Single-nucleus data r

CX3CR1 Promoter Methylation Disrupts Neuron-Microglia Cross-Talk

Score: 0.649 · developmental neurobiology · 2026-04-21

## **Molecular Mechanism and Rationale** The CX3CR1-mediated fractalkine signaling pathway represents a critical regula

TREM2-Mediated Astrocyte-Microglia Cross-Talk in Neurodegeneration

Score: 0.642 · neurodegeneration · 2026-04-07

## **Molecular Mechanism and Rationale** The triggering receptor expressed on myeloid cells 2 (TREM2) serves as a criti

TREM2-Mediated Astrocyte-Microglia Cross-Talk in Neurodegeneration

Score: 0.625 · neurodegeneration · 2026-04-07

**Molecular Mechanism and Rationale** The TREM2-mediated astrocyte-microglia cross-talk mechanism represents a complex

Domain boundary cross-talk hypothesis

Score: 0.600 · neurodegeneration · 2026-04-25

MAP6 stability activity may suppress adjacent tau lability activity through direct physical interaction or by altering t

TREM2-Mediated Oligodendrocyte-Microglia Cross-talk in White Matter Neurodegener

Score: 0.600 · neurodegeneration · 2026-04-21

## **Molecular Mechanism and Rationale** The TREM2 (Triggering Receptor Expressed on Myeloid cells 2) signaling pathway

Cardiovascular-Neuroinflammation Crosstalk Interruption

Score: 0.587 · Alzheimer's disease · 2026-04-04

# Cardiovascular-Neuroinflammation Crosstalk Interruption: Targeting Shared Inflammatory Mediators in Neurodegeneratio

Fractalkine Axis Amplification via CX3CR1 Positive Allosteric Modulators

Score: 0.563 · neurodegeneration · 2026-04-02

## Mechanistic Overview Fractalkine Axis Amplification via CX3CR1 Positive Allosteric Modulators starts from the claim t

Soluble CX3CL1 cleavage by ADAM proteases disengages fractalkine signaling, remo

Score: 0.540 · neurodegeneration · 2026-04-22

## Mechanistic Overview Soluble CX3CL1 cleavage by ADAM proteases disengages fractalkine signaling, removing the neurona

NAC + Ferrostatin-1 Combination for Peroxynitrite-Ferroptosis Crosstalk

Score: 0.530 · neurodegeneration · 2026-04-25

Combining NAC (GSH precursor/peroxynitrite scavenger) with ferrostatin-1 (specific ferroptosis inhibitor) provides dual

Tripartite Synapse Cell Type-Nonautonomous Crosstalk: Coordinated Failure

Score: 0.510 · neurodegeneration · 2026-04-22

## Mechanistic Overview Tripartite Synapse Cell Type-Nonautonomous Crosstalk: Coordinated Failure starts from the claim

C1Q-Glia Cross-Talk in Vascular Dementia Pathogenesis

Score: 0.470 · neuroinflammation · 2026-04-21

## Mechanistic Overview C1Q-Glia Cross-Talk in Vascular Dementia Pathogenesis starts from the claim that modulating C1QA