protein 1,311 words KG: TARDBPPROTEIN
Contents

TARDBP/TDP-43 Protein

🔬 Protein Info
Gene SymbolTARDBP
AliasesTARDBPPROTEIN
Chromosome1p36
Protein TypeTranscription Factor
Target ClassTranscription Factor
FunctionRNA-binding and transcription regulation, challenging for small molecule targeting
Mechanism of ActionRNA-binding and transcription regulation, challenging for small molecule targeting
Subcellular Localization**Acetylation**: At K263, K331, affects RNA binding
DruggabilityLow (0.43)
Clinical StagePhase III
Molecular Weight43 kDa
Amino Acids4477 aa
PathwaysApoptosis, Autophagy, Immune Response, Oxidative Stress, Tdp-43
UniProt IDA0A087WYY0
GeneCardsTARDBP
Human Protein AtlasTARDBP
Associated DiseasesAD, ALI, Als, ALS-FTD, Alzheimer
Known Drugs/Compoundsrapamycin, RAPAMYCIN, Transcribed Rnas
InteractionsABCA1, AD, AIF1, ALS, ALS-CAUSING MUTATIONS, AMPK
SciDEX TargetView Target Profile (7 clinical trials)
SciDEX HypothesesSTMN2 Cryptic Exon Inclusion is the Earliest Loss-
Cross-Seeding Prevention Strategy
Glial Neuroinflammatory Amplification by TDP-43 Pa (+7 more)
KG Connections1210 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING

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🌐 Cross-references

UniProtWikipedia

Related Hypotheses (18)

Engineered Apolipoprotein E4-Neutralizing Shuttle Peptides
Score: 0.72
Cross-Seeding Prevention Strategy
Score: 0.69
Glycine-Rich Domain Competitive Inhibition
Score: 0.64
Cryptic Exon Silencing Restoration
Score: 0.53
RNA-Binding Competition Therapy for TDP-43 Cross-Seeding
Score: 0.47
Selective APOE4 Degradation via Proteolysis Targeting Chimer
Score: 0.79
Competitive APOE4 Domain Stabilization Peptides
Score: 0.78
APOE4 Allosteric Rescue via Small Molecule Chaperones
Score: 0.76
Targeted APOE4-to-APOE3 Base Editing Therapy
Score: 0.76
APOE Isoform Expression Across Glial Subtypes
Score: 0.74
APOE4-Selective Lipid Nanoemulsion Therapy
Score: 0.74
Interfacial Lipid Mimetics to Disrupt Domain Interaction
Score: 0.72
APOE Isoform Conversion Therapy
Score: 0.72
Arginine Methylation Enhancement Therapy
Score: 0.65
Heat Shock Protein 70 Disaggregase Amplification
Score: 0.62
Serine/Arginine-Rich Protein Kinase Modulation
Score: 0.62
Designer TRAK1-KIF5 fusion proteins accelerate therapeutic m
Score: 0.62
Liquid-Liquid Phase Separation Modifier Therapy
Score: 0.55

Related Analyses (6)

TDP-43 phase separation therapeutics for ALS-FTD
neurodegeneration · archived
RNA binding protein dysregulation across ALS FTD and AD
neurodegeneration · archived
Mitochondrial transfer between astrocytes and neurons
neurodegeneration · archived
Protein aggregation cross-seeding across neurodegenerative d
neurodegeneration · completed
RNA binding protein dysregulation across ALS FTD and AD
neurodegeneration · completed

Related Experiments (13)

TDP-43 mitochondrial invasion and DNA release via mPTP
exploratory · proposed · Score: 0.90
TDP-43 mitochondrial invasion and mtDNA release in iPSC moto
exploratory · proposed · Score: 0.90
TDP-43 mutant mouse model cGAS/STING pathway analysis
validation · proposed · Score: 0.90
cGAS/STING pathway validation in TDP-43 mutant mice
validation · proposed · Score: 0.85
cGAMP biomarker analysis in ALS patient spinal cord samples
exploratory · proposed · Score: 0.80

See Also (15)

Neurodegeneration
disease · KG edge: implicated_in
mitochondrial-dysfunction-neurodegeneration-comparison
disease · Pages share 5 hypotheses
Familial vs Sporadic Neurodegeneration Comparison
disease · Pages share 5 hypotheses
UPenn Observational Research Repository (NCT04715399)
clinical · Pages share 5 hypotheses
Exosomal miR-155 in Neurodegeneration
biomarker · Pages share 4 hypotheses

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