gene 2,845 words KG: VAMP2
Contents

VAMP2 Gene - Synaptobrevin-2

🧬 Gene Info
Gene SymbolVAMP2
AliasesPage for VAMP2 Gene, Synaptobrevin-2
Chromosome17p13.1
Protein TypeProtein
FunctionVesicle Docking: VAMP2 on vesicles pairs with syntaxin-1A on plasma membrane
Molecular Weight12.6 kDa
Amino Acids116 aa
Exons5
UniProt IDP60880
GeneCardsVAMP2
Human Protein AtlasVAMP2
N-terminal region (residues 1-28)A proline-rich, highly flexible segment that lacks secondary structure. This region contains the site for phosphorylation by casein kinase 2, which modulates VAMP2 function.
SNARE motif (residues 29-60)The central region that forms the core of the SNARE complex. This alpha-helical segment undergoes conformational changes during SNARE assembly.
Transmembrane domain (residues 76-94)A single-pass transmembrane anchor that tethers VAMP2 to synaptic vesicles. This region consists of a helical transmembrane segment near the C-terminus.
C-terminal region (residues 95-116)The extreme C-terminus contributes to membrane association and may participate in interactions with other SNARE proteins.
Associated DiseasesAlzheimer's disease, Parkinson's disease
InteractionsAGING, ALPHA-SYNUCLEIN, AMYLOID, AND, APOE, APOE3
KG Connections76 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING

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🌐 Cross-references

NCBI GeneUniProtGeneCardsWikipediaHGNCEnsembl

Related Hypotheses (17)

Selective APOE4 Degradation via Proteolysis Targeting Chimer
Score: 0.79
Competitive APOE4 Domain Stabilization Peptides
Score: 0.78
APOE4 Allosteric Rescue via Small Molecule Chaperones
Score: 0.76
Targeted APOE4-to-APOE3 Base Editing Therapy
Score: 0.76
APOE Isoform Expression Across Glial Subtypes
Score: 0.74
CYP46A1 Overexpression Gene Therapy
Score: 0.73
Interfacial Lipid Mimetics to Disrupt Domain Interaction
Score: 0.72
Perforant Path Presynaptic Terminal Protection Strategy
Score: 0.70
Astrocytic Lipoxin A4 Pathway Restoration via ALOX15 Gene Th
Score: 0.69
Excitatory Neuron Vulnerability via SLC17A7 Downregulation
Score: 0.67
Synaptic Vesicle Tau Capture Inhibition
Score: 0.58
TREM2-mediated microglial tau clearance enhancement
Score: 0.62
LRP1-Dependent Tau Uptake Disruption
Score: 0.60
VCP-Mediated Autophagy Enhancement
Score: 0.59
Extracellular Vesicle Biogenesis Modulation
Score: 0.58
HSP90-Tau Disaggregation Complex Enhancement
Score: 0.57
Trans-Synaptic Adhesion Molecule Modulation
Score: 0.54

Related Analyses (6)

Selective vulnerability of entorhinal cortex layer II neuron
neurodegeneration · archived
Neuroinflammation resolution mechanisms and pro-resolving me
neurodegeneration · archived
Lipid raft composition changes in synaptic neurodegeneration
neurodegeneration · completed
Circuit-level neural dynamics in neurodegeneration
neuroscience · archived
Tau propagation mechanisms and therapeutic interception poin
neurodegeneration · archived

Related Experiments (1)

Synaptic Vesicle Trafficking Dysfunction Validation in Parki
clinical · proposed · Score: 0.40

See Also (14)

SNAP-25
biomarker · KG edge: co_discussed
NeuRon Therapeutics
company · KG edge: inhibits
Neurodegeneration
disease · KG edge: interacts_with
Amyloid-Related Imaging Abnormalities (ARIA)
entity · KG edge: interacts_with
BAX Gene
gene · KG edge: expressed_in

Knowledge Graph (12 edges)

APOE4 interacts_with VAMP2
APOE interacts_with VAMP2
SNAP25 co_discussed VAMP2
TAU co_discussed VAMP2
STX1A expressed_in VAMP2
NLRP3 expressed_in VAMP2
BDNF expressed_in VAMP2
VAMP2 expressed_in PSD95
VAMP2 expressed_in BAX
VAMP2 expressed_in SNAP25

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