gene 2,016 words KG: SPTLC1
Contents

SPTLC1 - Serine Palmitoyltransferase

🧬 Gene Info
Gene SymbolSPTLC1
Full NameSerine Palmitoyltransferase Long Chain Base Subunit 1
AliasesPage for SPTLC1, Serine Palmitoyltransferase 1
Chromosome9q22.31
Protein TypeGene
Target ClassProtein
FunctionThe canonical reaction catalyzed by SPT involves the condensation of L-serine with palmitoyl-CoA (C16:0) to produce 3-ketosphinganine, which is subsequently reduced to sphinganine (dihydrosphingosine)
Mechanism of ActionPrioritized from 1 SciDEX hypotheses, including: APOE-Mediated Synaptic Lipid Raft Stabilization
DruggabilityUndruggable (0.23)
Molecular Weight53 kDa
Amino Acids473 aa
PathwaysCholesterol, Sphingolipid biosynthesis, Sphingolipid metabolism
UniProt IDO15269
GeneCardsSPTLC1
Human Protein AtlasSPTLC1
Associated DiseasesAls, Amyotrophic lateral sclerosis, disease, Early-Onset Motor Neuron Disease
Known Drugs/CompoundsCHEMBL1241090, CHEMBL4584997, CHEMBL4541898
InteractionsABCA1, Actin, ALS, amyotrophic lateral sclerosis, AMYOTROPHIC LATERAL SCLEROSIS, APOE4
SciDEX TargetView Target Profile
SciDEX HypothesesAPOE-Mediated Synaptic Lipid Raft Stabilization
KG Connections212 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING

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Knowledge Graph

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🌐 Cross-references

NCBI GeneUniProtGeneCardsWikipediaHGNCEnsembl

Related Hypotheses (17)

APOE-Mediated Synaptic Lipid Raft Stabilization
Score: 0.65
Selective APOE4 Degradation via Proteolysis Targeting Chimer
Score: 0.79
Competitive APOE4 Domain Stabilization Peptides
Score: 0.78
APOE4 Allosteric Rescue via Small Molecule Chaperones
Score: 0.76
Targeted APOE4-to-APOE3 Base Editing Therapy
Score: 0.76
APOE Isoform Expression Across Glial Subtypes
Score: 0.74
Interfacial Lipid Mimetics to Disrupt Domain Interaction
Score: 0.72
Sphingomyelin Synthase Activators for Raft Remodeling
Score: 0.69
The Mitochondrial-Lysosomal Metabolic Coupling Dysfunction
Score: 0.65
Serine/Arginine-Rich Protein Kinase Modulation
Score: 0.62
TFEB-PGC1α Mitochondrial-Lysosomal Decoupling
Score: 0.62
Sphingolipid Metabolism Reprogramming
Score: 0.62
APOE-Dependent Autophagy Restoration
Score: 0.88
APOE4-Selective Lipid Nanoemulsion Therapy
Score: 0.74
APOE-TREM2 Interaction Modulation
Score: 0.74
Proteostasis Enhancement via APOE Chaperone Targeting
Score: 0.72
APOE Isoform Conversion Therapy
Score: 0.72

Related Analyses (5)

Mechanistic role of APOE in neurodegeneration
neurodegeneration · archived
TDP-43 phase separation therapeutics for ALS-FTD
neurodegeneration · archived
Lipid raft composition changes in synaptic neurodegeneration
neurodegeneration · completed
Astrocyte Reactivity Subtypes in Neurodegeneration
neurodegeneration · archived
Circuit-level neural dynamics in neurodegeneration
neuroscience · archived

Related Experiments (1)

ER-Golgi Secretory Pathway Dysfunction in PD - Experiment De
clinical · proposed · Score: 0.40

See Also (7)

Amyotrophic Lateral Sclerosis
redirect · KG edge: activates
Apoptosis in Neurodegeneration
entity · KG edge: activates
Autophagy Enhancement Drug Screening for Neurodegenerat
experiment · KG edge: activates
ABCA1 - ATP-Binding Cassette Transporter A1
gene · KG edge: activates
cct5
gene · KG edge: associated_with

Knowledge Graph (12 edges)

SPTLC1 associated_with Amyotrophic Lateral Sclerosis
SPTLC1 involved_in Sphingolipid biosynthesis
SPTLC1 interacts_with ORMDL proteins
SPTLC1 associated_with Amyotrophic lateral sclerosis
SPTLC1 associated_with Juvenile amyotrophic lateral sclerosis
SPTLC1 regulates Sphingolipid metabolism
SPTLC1 involved_in 1-Deoxysphingolipids
Serine palmitoyltransferase involved_in SPTLC1
CLUSTERIN co_discussed SPTLC1
SPTLC1 activates SPTLC2

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