CLDN1

Claudin-1

Score: 0.448 Price: $0.45 Undruggable Druggability Status: active Wiki: CLDN1
🧠 Neurodegeneration
HYPOTHESES
1
PAPERS
0
KG EDGES
153
DEBATES
1

3D Protein Structure

🧬 CLDN1 β€” PDB 5OY6 Click to expand

Experimental structure from RCSB PDB | Powered by Mol*

Druggability & Clinical Context

Druggability
Undruggable
Score: 0.20
Clinical Stage
Phase II
Target Class
Structural Protein
Safety
0.30
Druggability Analysis
Drug Development0.30
Structural Tractability0.30
Target Class0.50
Safety Profile0.30
Key Metrics
PDB Structures:
0
Known Drugs:
1
Approved:
0
In Clinical Trials:
0
Drug Pipeline (1 compounds)
1 Preclinical
Druggability Rationale: Based on the available data, CLDN1 presents significant challenges for neurodegeneration drug discovery due to its structural protein classification and lack of established druggable mechanisms. While preclinical anti-CLDN1 antibodies show potential and AlphaFold structural data provides some insights, the protein's tight junction modulation role makes traditional small molecule targeting difficult. The ongoing Phase 2 clinical trial evaluating safety and exploratory efficacy suggests emerging interest, but the target remains fundamentally undruggable with no clear pharmacological intervention strategy for neurological applications.
Mechanism: Tight junction protein modulation - no established druggable mechanisms
Drug Pipeline (1 compounds)
1 Preclinical
Known Drugs:
Anti-CLDN1 antibodies (preclinical) β€” Tight junction modulator, originally for HCV entry
Structural Data:
PDB β€”AlphaFold βœ“Cryo-EM β€”
UniProt: O95832

🧬 3D Protein Structure

🧬 CLDN1 — PDB 5OY6 Click to expand interactive 3D viewer

Experimental structure from RCSB PDB | Powered by Mol* | Rotate: click+drag | Zoom: scroll

Selectivity & Safety Considerations

CLDN1 belongs to a 27-member claudin family with significant sequence homology, creating substantial selectivity challenges for any small-molecule modulator; antibody approaches offer superior selectivity through epitope targeting. Off-target effects on other claudins (CLDN2, CLDN3, CLDN5) could disrupt multiple tissue barriers (intestinal, renal, vascular), complicating therapeutic windows.

3D Protein Structure (AlphaFold)

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AlphaFold predicted structure available for O95832

View AlphaFold Structure

Clinical Trials (1)

Relevant trials from ClinicalTrials.gov

Active
0
Completed
1
Total Enrollment
8
By Phase
PHASE2: 1
Evaluation of the Long-term Safety, Pharmacodynamics, and Exploratory Efficacy of GZ/SAR402671 in Treatment-NaΓ―ve Adult Completed
PHASE2 NCT02489344 n=8
Fabry Disease
Interventions: GZ/SAR402671
Sponsor: Genzyme, a Sanofi Company

Linked Hypotheses (0)

No linked hypotheses

Linked Experiments (0)

No linked experiments

Scoring Dimensions

Portfolio 0.49 (25%) Druggability 0.20 (20%) Evidence 0.54 (20%) Safety 0.30 (15%) Competitive 0.40 (10%) Connectivity 0.90 (10%) 0.448 composite

Knowledge Graph (20)

activates (5)

OCLNCLDN1TNFCLDN1CLDN1MLCKCLDN1NRF2CLDN1TNF

associated with (1)

CLDN1neurodegeneration

expressed in (1)

CLDN1OCLN

inhibits (5)

IL4CLDN1IL13CLDN1CLDN1ARNTCLDN1AHRCLDN1STAT6

interacts with (6)

CLDN1OCLNCLDN1ZO1CLDN1MLCKOCLNCLDN1ZO1CLDN1
▸ Show 1 more
MLCKCLDN1

therapeutic target (2)

FGF20CLDN1BRG1CLDN1

Debate History (1)

Should CLDN1 (Claudin-1) be prioritized as a therapeutic target for neurodegener2026-04-22