entity

SIRT

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about SIRT: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

10Connections
21Hypotheses
0Analyses
9Outgoing
1Incoming
6Experiments
0Debates
AI portrait of SIRT

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Wiki Pages (20)

Knowledge base pages for this entity

Epigenetic-Metabolic Coupling: SIRT1 Activator + NAD+ Precursor

idea · 3877 words

SIRT1 Signaling Pathway in Alzheimer's Disease

pathway · 2490 words

SPAM1-SIRT6 Positive Allosteric Modulator in Neurodegeneration

mechanism · 1742 words

SPAM1: SIRT6 Positive Allosteric Modulator

therapeutic · 1688 words

SIRT1 Activators for Parkinson's Disease

mechanism · 1622 words

Outgoing (9)

TargetRelationTypeStr
NAD+ depletioncausesmechanism0.95
Neurodegenerationmodulatesprocess0.90
Deacetylationcatalyzesprocess0.90
Longevityregulatesphenotype0.85
IDH-mutant tumorsmodulatesunknown0.85

Incoming (1)

SourceRelationTypeStr
Calorie Restrictionactivatesprocess0.85

Targeting Hypotheses (21)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
SIRT1-Mediated Reversal of TREM2-Dependent Microglial Senesc 0.893 neurodegeneration Gene expression changes in aging mouse b
SIRT1 Activation Couples Mitochondrial Biogenesis to Ferropt 0.824 neurodegeneration View
NMN Supplementation Restores SIRT1/p66Shc/FOXO3 Epigenetic A 0.790 neurodegeneration epigenetic reprogramming aging neurons
SIRT1/PGC-1α Axis Activation to Preserve Mitochondrial Resil 0.778 neurodegeneration Gut Microbiome Analysis in Parkinson's D
H3: SIRT1 Insufficiency Disconnects Metabolic Sensing from E 0.770 neurodegeneration Investigate mechanisms of epigenetic rep
TREM2-SIRT1 Metabolic Senescence Circuit in Microglial Aging 0.744 neurodegeneration Gene expression changes in aging mouse b
SIRT3-Mediated Mitochondrial Deacetylation Failure with PINK 0.738 Alzheimer's Disease Cell type vulnerability in Alzheimers Di
Metabolic Inflexibility Precedes Transcriptional Reprogrammi 0.735 neurodegeneration What is the optimal therapeutic window f
NAD+ Decline and SIRT1 Deficiency Drive Epigenetic Reprogram 0.700 neurodegeneration What molecular mechanisms drive microgli
LRRK2 Volume Sensor Hijacking Drives Metabolic Dysregulation 0.666 neurodegeneration Does LRRK2's role as a lysosomal volume
Caloric Restriction Mimetic Combination Therapy (Metformin + 0.640 neurodegeneration -
SIRT6-NAD+ Axis Enhancement Therapy 0.612 neurodegeneration Epigenetic clocks and biological aging i
NRF2-Mediated Metabolic Reprogramming: HBOT as Direct NAMPT/ 0.602 neurodegeneration View
NAMPT-SIRT1 Axis as Master Regulator of SASP-Dependent Compl 0.592 neurodegeneration test
SIRT3 loss creates a mitochondrial acetylation-stress loop t 0.560 neurodegeneration What mechanisms drive the self-amplifyin
SIRT1 Activation Suppresses C9orf72-Mediated Neurodegenerati 0.560 neurodegeneration Test Preregistration Analysis
SIRT1-Mediated Epigenetic Restoration of MFSD2A Expression R 0.500 neuropharmacology What determines blood-brain barrier pene
SIRT3 gates microglial surveillance versus primed metabolism 0.482 neuroinflammation Do microglia actually switch between gly
SIRT1 Activator Therapy for Mitochondrial Epigenetic Dysregu 0.480 neurodegeneration Comparative epigenetic signatures across
NAD+-SIRT1-H3K9me3 restoration enables true senescence rever 0.380 Alzheimer's disease Can metabolic interventions truly revers
SIRT3 Mitochondrial Activation to Counter Hub-Specific Energ 0.344 connectomics Human connectome alterations in Alzheime

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Experiments (6)

Experimental studies targeting or related to this entity

ExperimentTypeDiseaseScoreFeasibilityModelStatusEst. Cost
Irisin effects on osteogenic differentiation in mesenchymal stem cells exploratory bone fracture 0.900 0.00 mouse bone mesenchymal stem ce proposed N/A
Epigenetic clocks association with brain aging patterns in older women exploratory cognitive impairment and demen 0.900 0.00 human patients proposed N/A
iPSC-derived astrocyte-neuron co-culture mitochondrial transfer in PD exploratory Parkinson's disease 0.900 0.00 iPSC-derived dopaminergic neur proposed N/A
PGC-1α knockout analysis of PV+ interneuron maturation validation neurodevelopmental disorders 0.850 0.00 knockout mice proposed N/A
PV+ interneuron subtype diversification analysis exploratory neurodevelopmental disorders 0.750 0.00 mouse cortical PV+ interneuron proposed N/A
Sirtuin Dysfunction Validation in Parkinson's Disease clinical Parkinson's Disease 0.400 0.50 human proposed $6,550,000

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
Transcriptomic cytoarchitecture reveals principles of human neocortex organizati [PMID:37824655] Jorstad NL, Close J, Johansen N, Yanny A Science 2023 186
Targeted nanovesicular delivery of dexmedetomidine modulates microglial lysosoma [PMID:41778730] Zhang Y, Jiang H, Zhang F, Liao J Neural regeneration research 2026 0
The myocardial ischemic cascade network and multi-target synergistic interventio [PMID:41544859] Qi L, Yi J, Shen Y, Jiang H, Yao X et al Biochem Pharmacol 2026 0
Homoplantaginin ameliorates osteoarthritis by activating Sirt3/PINK1/Parkin sign [PMID:41720004] Zhang H, Xiao J, Yi Y, Chen B, Lv W et a Phytomedicine 2026 0
Kakkalide promotes spinal cord injury repair by regulating microglial M2 polariz [PMID:41720005] You T, Dai B, Ding X, He Z, Peng J et al Phytomedicine 2026 0
Interaction of mtROS-Immune-Inflammatory Vicious Cycle Activation in Sepsis-Indu [PMID:41905969] Wang Y, Yuan Q Clin Exp Pharmacol Physiol 2026 0
Metformin attenuates HSV-1-induced neuropathic pain by restoring Sirt3-mediated [PMID:41896899] Yuanyuan Fang; Mengqiu Deng; Kesheng Hua Cell communication and signali 2026 0
Hydrogen-Enriched Hyaluronic Acid Dressing Ameliorates Diabetic Foot Ulcer via P [PMID:41906653] Xu Z, Cui X, Chu H, Wan H, Xie Y, Wang Y Journal of diabetes 2026 0
Inhibition of mitochondrial ROS turns LC3-associated phagocytosis to autophagy u [PMID:41896101] Cheng YL, Su MS, Liao CC, Chang TW, Hsie Journal of microbiology, immun 2026 0
Hyperoside stabilizes ACAT1 to promote fatty acid oxidation and attenuate kidney [PMID:41903436] Shan C, Szili-Torok T, Yue G, Zhang L, M Phytomedicine : international 2026 0
Melatonin Ameliorates decaBDE-Induced Autism-Relevant Behaviors Through Promotin [PMID:41897550] ["Gao L", "Shen J", "Gao J", "Li T", "Ya Antioxidants (Basel, Switzerla 2026 0
Enhancing TREM2 expression activates microglia and modestly mitigates tau pathol [PMID:40122810] ["Chen Kai", "Li Fuyao", "Zhang Shuwen", Journal of neuroinflammation 2025 0
Sirtuins as mediators and targets of arsenic toxicity: unraveling signaling path [PMID:40844627] El-Mahrouk SR, El-Kadi AOS Archives of toxicology 2025 0
Targeted activation of ErbB4 receptor ameliorates neuronal deficits and neuroinf [PMID:40089796] Liu C, Zhao Y, Zhang W, Dao JJ, Li Q, Hu Journal of neuroinflammation 2025 0
Phenylpropanoids of Eleutherococcus senticosus (Rupr. & maxim.) maxim. Alleviate [PMID:40081261] Yang R, Meng X, Zhao W, Xu SQ, Wang SY, Bioorganic chemistry 2025 0
Enhancing TREM2 expression activates microglia and modestly mitigates tau pathol [PMID:40122810] ["Chen Kai", "Li Fuyao", "Zhang Shuwen", Journal of neuroinflammation 2025 0
Small molecule DDQ involvement of ERK-mediated signaling pathway with enhanced m [PMID:40222458] Pradeepkiran JA, Kshirsagar S, Alvir RV, Biochimica et biophysica acta. 2025 0
The effects of Honokiol on the liver of Alzheimer's disease mice by upregulating [PMID:40776632] Wang H, Liu J, Tian YR, Zhu F, Li H Journal of Alzheimer's disease 2025 0
SIRT1 and SIRT6: The role in aging-related diseases. [PMID:37499928] You Y, Liang W Biochim Biophys Acta Mol Basis 2023 0
SIRT1 and SIRT6: The role in aging-related diseases. [PMID:37499928] You Y, Liang W Biochimica et biophysica acta. 2023 0

Debates (0)

Multi-agent debates referencing this entity

No debates reference this entity

Related Research

Hypotheses and analyses mentioning SIRT in their description or question text

TREM2-SIRT1 Metabolic Senescence Circuit in Microglial Aging

Score: 0.744 · neurodegeneration · 2026-04-12

**Molecular Mechanism and Rationale** The TREM2-SIRT1 metabolic senescence circuit represents a critical regulatory net

SIRT3-Mediated Mitochondrial Deacetylation Failure with PINK1/Parkin Mitophagy D

Score: 0.738 · Alzheimer's Disease · 2026-04-02

## Mechanistic Overview SIRT3-Mediated Mitochondrial Deacetylation Failure with PINK1/Parkin Mitophagy Dysfunction start

Metabolic Inflexibility Precedes Transcriptional Reprogramming (NAD+/SIRT3 Axis)

Score: 0.735 · neurodegeneration · 2026-04-22

**Molecular Mechanism and Rationale** The NAD+/SIRT3 axis represents a critical regulatory hub controlling mitochondria

NAD+ Decline and SIRT1 Deficiency Drive Epigenetic Reprogramming Toward Senescen

Score: 0.700 · neurodegeneration · 2026-04-22

## **Molecular Mechanism and Rationale** The molecular foundation of this hypothesis centers on the intricate relations

LRRK2 Volume Sensor Hijacking Drives Metabolic Dysregulation via SIRT1/PGC1α Sup

Score: 0.666 · neurodegeneration · 2026-04-16

## Mechanistic Overview LRRK2 Volume Sensor Hijacking Drives Metabolic Dysregulation via SIRT1/PGC1α Suppression starts

SIRT6-NAD+ Axis Enhancement Therapy

Score: 0.612 · neurodegeneration · 2026-04-02

## Mechanistic Overview SIRT6-NAD+ Axis Enhancement Therapy starts from the claim that modulating SIRT6 within the disea

NRF2-Mediated Metabolic Reprogramming: HBOT as Direct NAMPT/SIRT1 Activator for

Score: 0.602 · neurodegeneration · 2026-04-17

## Mechanistic Overview NRF2-Mediated Metabolic Reprogramming: HBOT as Direct NAMPT/SIRT1 Activator for Reverse Senescen

NAMPT-SIRT1 Axis as Master Regulator of SASP-Dependent Complement Amplification

Score: 0.592 · neurodegeneration · 2026-04-16

## Mechanistic Overview NAMPT-SIRT1 Axis as Master Regulator of SASP-Dependent Complement Amplification starts from the

SIRT3 loss creates a mitochondrial acetylation-stress loop that weakens antioxid

Score: 0.560 · neurodegeneration · 2026-04-25

Declining SIRT3 activity leaves SOD2, IDH2, and permeability-transition regulators hyperacetylated, reducing mitochondri

SIRT1 Activation Suppresses C9orf72-Mediated Neurodegeneration

Score: 0.560 · neurodegeneration · 2026-04-28

SIRT1 activation promotes mitophagy via PINK1/Parkin, reduces oxidative stress, and decreases DPR levels in cellular mod

SIRT1-Mediated Epigenetic Restoration of MFSD2A Expression Re-enables SPM Precur

Score: 0.500 · neuropharmacology · 2026-04-13

## Mechanistic Overview SIRT1-Mediated Epigenetic Restoration of MFSD2A Expression Re-enables SPM Precursor Transport in

SIRT3 gates microglial surveillance versus primed metabolism through mitochondri

Score: 0.482 · neuroinflammation · 2026-04-21

## Mechanistic Overview SIRT3 gates microglial surveillance versus primed metabolism through mitochondrial deacetylation

SIRT1 Activator Therapy for Mitochondrial Epigenetic Dysregulation

Score: 0.480 · neurodegeneration · 2026-04-25

SIRT1 Activator Therapy for Mitochondrial Epigenetic Dysregulation

NAD+-SIRT1-H3K9me3 restoration enables true senescence reversal, while incomplet

Score: 0.380 · Alzheimer's disease · 2026-04-26

Partial metabolic interventions (e.g., mTOR inhibition alone) suppress SASP secretion but leave growth arrest intact bec