BDNF

Brain Derived Neurotrophic Factor

Score: 0.586 Price: $0.59 Low Druggability Status: active Wiki: BDNF
๐Ÿง  Neurodegeneration
HYPOTHESES
47
PAPERS
18
KG EDGES
1750
DEBATES
1

3D Protein Structure

🧬 BDNF โ€” PDB 1BND Click to expand

Experimental structure from RCSB PDB | Powered by Mol*

Druggability & Clinical Context

Druggability
Low
Score: 0.29
Clinical Stage
Phase II
Target Class
Ligand
Safety
0.60
Druggability Analysis
Drug Development0.30
Structural Tractability0.30
Target Class0.50
Safety Profile0.60
Key Metrics
PDB Structures:
0
Known Drugs:
1
Approved:
0
In Clinical Trials:
0
Drug Pipeline (1 compounds)
1 Preclinical
Druggability Rationale: BDNF presents low druggability (0.30 score) primarily due to its protein nature, poor blood-brain barrier penetration, and limited structural characterization (no PDB structures available despite AlphaFold predictions). While protein replacement and small molecule mimetic approaches are theoretically viable, as evidenced by preclinical Dihexa development, the absence of well-defined ligand binding pockets and high protein instability significantly hamper traditional drug development strategies.
Mechanism: Protein replacement therapy or small molecule mimetic
Drug Pipeline (1 compounds)
1 Preclinical
Known Drugs:
Dihexa (preclinical) โ€” Alzheimer's disease
Structural Data:
PDB โ€”AlphaFold โœ“Cryo-EM โ€”
UniProt: Q969N8

🧬 3D Protein Structure

🧬 BDNF — PDB 1BND Click to expand interactive 3D viewer

Experimental structure from RCSB PDB | Powered by Mol* | Rotate: click+drag | Zoom: scroll

Selectivity & Safety Considerations

BDNF selectivity is less relevant than isoform considerations, as the mature and pro-BDNF forms have distinct biological activities and potential opposing effects. Off-target risks primarily involve non-specific neurotrophic pathway activation; selectivity against other neurotrophins (NGF, NT-3, NT-4) is critical to avoid unintended cellular proliferation or pain sensitization.

3D Protein Structure (AlphaFold)

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AlphaFold predicted structure available for Q969N8

View AlphaFold Structure

Clinical Trials (4)

Relevant trials from ClinicalTrials.gov

Active
1
Completed
2
Total Enrollment
451
By Phase
NA: 1 ยท PHASE1: 1 ยท PHASE2: 1 ยท Unknown: 1
A Clinical Trial of AAV2-BDNF Gene Therapy in Early Alzheimer's Disease and Mild Cognitive Impairment Recruiting
PHASE1 NCT05040217 n=12
Alzheimer's Disease, Mild Cognitive Impairment
Interventions: AAV2-BDNF Gene Therapy, AAV2-BDNF Gene Therapy
Sponsor: Mark Tuszynski | Started: 2022-02-07
Effects of Lithium and Divalproex'on Brain-Derived Neurotrophic Factor in Huntington's Disease Completed
PHASE2 NCT00095355 n=35
Huntington's Disease
Interventions: Lithium, Divalproex
Sponsor: National Institute of Neurological Disorders and Stroke (NIN | Started: 2004-10
Alzheimer's Disease and Physiological, Cognitive Function and BDNF Levels of Plasma Adaptation After Exercise Training Completed
NA NCT02968875 n=54
Alzheimer's Disease
Interventions: Endurance Training, therapeutic education meetings
Sponsor: University Hospital Center of Martinique | Started: 2015-07
PRedicting the EVolution of SubjectIvE Cognitive Decline to Alzheimer's Disease With Machine Learning Unknown
Unknown NCT05569083 n=350
Cognitive Decline, Mild Cognitive Impairment, Alzheimer Disease
Interventions: Genetic analysis of APOE and BDNF genes., EEG recording, CSF collection and AD biomarker measurem
Sponsor: Azienda Ospedaliero-Universitaria Careggi | Started: 2020-10-01

Linked Hypotheses (3)

Hippocampal CA3-CA1 synaptic rescue via DHHC2-mediated PSD95 palmitoylation stabilization0.861
Hippocampal CA3-CA1 circuit rescue via neurogenesis and synaptic preservation0.820
Neuroplasticity-Enhanced Learning Hypothesis0.555

Linked Experiments (1)

Exercise-BDNF-Mitophagy Biomarker Study in PD0.400

Scoring Dimensions

Portfolio 0.59 (25%) Druggability 0.29 (20%) Evidence 0.80 (20%) Safety 0.60 (15%) Competitive 0.40 (10%) Connectivity 0.90 (10%) 0.586 composite

Knowledge Graph (20)

associated with (1)

BDNFneurodegeneration

co discussed (15)

BMAL1BDNFHCRTR2BDNFCLOCKBDNFBDNFAQP4BDNFMTNR1A
▸ Show 10 more
BDNFCX3CR1BDNFHCRTBDNFCACNA1GBDNFADORA2ABDNFADRA2ACRHBDNFBDNFULK1FOXP3BDNFTNFABDNFPPARGC1ABDNF

interacts with (4)

CHR2BDNFBDNFCHR2GLP1RBDNFBDNFGLP1R

Debate History (1)

Should BDNF (Brain Derived Neurotrophic Factor) be prioritized as a therapeutic 2026-04-21