Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about ARK: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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Regenerate portrait ↻Knowledge base pages for this entity
| Target | Relation | Type | Str |
|---|---|---|---|
| benchmark_ot_ad_answer_key:ARK | data_in | dataset_row | 0.00 |
| DRONC | activates | protein | 0.80 |
| Source | Relation | Type | Str |
|---|---|---|---|
| benchmark_ot_ad_answer_key:ARK | data_in | dataset_row | 0.00 |
Hypotheses where this entity is a therapeutic target
Scientific analyses that reference this entity
neurodegeneration | 2026-04-11 | 0 hypotheses
neurodegeneration | 2026-04-11 | 0 hypotheses
Experimental studies targeting or related to this entity
| Experiment | Type | Disease | Score | Feasibility | Model | Status | Est. Cost |
|---|---|---|---|---|---|---|---|
| AECII-specific HMGCS2 overexpression in mouse pulmonary fibrosis | validation | idiopathic pulmonary fibrosis | 0.950 | 0.00 | C57BL/6 mice with AECII-specif | proposed | N/A |
| Ketogenic diet fat threshold analysis in wild-type mice | validation | metabolic disease | 0.900 | 0.00 | C57BL/6J wild-type mice | proposed | N/A |
| HMGCS2 gain-of-function in AECII lipid metabolism regulation | exploratory | idiopathic pulmonary fibrosis | 0.900 | 0.00 | human AECIIs | proposed | N/A |
| Ketogenic diet efficacy in diet-induced obese mice | validation | obesity, metabolic disease | 0.900 | 0.00 | C57BL/6J diet-induced obese mi | proposed | N/A |
| Autophagy receptor identification for stress granule elimination | exploratory | neurodegenerative diseases | 0.900 | 0.00 | cultured cells under arsenite | proposed | N/A |
| Epigenetic clocks association with brain aging patterns in older women | exploratory | cognitive impairment and demen | 0.900 | 0.00 | human patients | proposed | N/A |
| Chi3l1 deletion effects on baseline glial activation in mice | validation | baseline neuroinflammation | 0.900 | 0.00 | Chi3l1 knockout mice | proposed | N/A |
| iPSC-derived astrocyte-neuron co-culture mitochondrial transfer in PD | exploratory | Parkinson's disease | 0.900 | 0.00 | iPSC-derived dopaminergic neur | proposed | N/A |
| Microarray and single-cell RNA analysis of lipid metabolism genes | exploratory | idiopathic pulmonary fibrosis | 0.850 | 0.00 | human patients, mouse models | proposed | N/A |
| CHI3L1 variant association with AD progression in human patients | exploratory | Alzheimer's disease | 0.850 | 0.00 | human patients | proposed | N/A |
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| Transcriptomic cytoarchitecture reveals principles of human neocortex organizati [PMID:37824655] | Jorstad NL, Close J, Johansen N, Yanny A | Science | 2023 | 186 |
| TDP-43 Triggers Mitochondrial DNA Release via mPTP to Activate cGAS/STING in ALS [PMID:33031745] | Yu CH, Davidson S, Harapas CR, Hilton JB | Cell | 2020 | 2 |
| Targeted nanovesicular delivery of dexmedetomidine modulates microglial lysosoma [PMID:41778730] | Zhang Y, Jiang H, Zhang F, Liao J | Neural regeneration research | 2026 | 0 |
| Monocyte LOXHD1 and RHOB Expression Predictive of Progressive Systemic Sclerosis [PMID:40771159] | Padilla CM, Lafyatis R, Gibson KF, Morse | Arthritis Care Res (Hoboken) | 2026 | 0 |
| Obstructive sleep apnea, biomarker profiles, and clinical progression in Parkins [PMID:41499940] | Zhu S, An D, Liu X | Sleep Med | 2026 | 0 |
| The myocardial ischemic cascade network and multi-target synergistic interventio [PMID:41544859] | Qi L, Yi J, Shen Y, Jiang H, Yao X et al | Biochem Pharmacol | 2026 | 0 |
| SuPAR levels are increased in sera of euthymic patients with bipolar disorder an [PMID:41605346] | Kök Kendirlioğlu B, Çörekli Kaymakçı E, | J Affect Disord | 2026 | 0 |
| Chitinase-like Proteins YKL-40 and YKL-39 in Colorectal Cancer. [PMID:41677627] | Ivanova T, Kazakova M, Dikov D, Dzhambov | Cells | 2026 | 0 |
| Correction: CHI3L1: An Emerging Player in Neuroinflammation and Neurodegeneratio [PMID:41699333] | Mushtaq Umar; Seh Bilal Ahmad; Khanday F | Molecular Neurobiology | 2026 | 0 |
| UNC93B1 promotes pancreatic cancer progression through modulation of cGAS-STING [PMID:41716413] | Yang H, Li Y, Su J, Zhang H, Zhu W et al | Front Immunol | 2026 | 0 |
| Homoplantaginin ameliorates osteoarthritis by activating Sirt3/PINK1/Parkin sign [PMID:41720004] | Zhang H, Xiao J, Yi Y, Chen B, Lv W et a | Phytomedicine | 2026 | 0 |
| Kakkalide promotes spinal cord injury repair by regulating microglial M2 polariz [PMID:41720005] | You T, Dai B, Ding X, He Z, Peng J et al | Phytomedicine | 2026 | 0 |
| Association of Alzheimer's disease progression with YKL40 levels in peripheral b [PMID:41725729] | Yang Q, Wang R, Pei J, Fu Q, Zhan Y et a | Front Neurol | 2026 | 0 |
| Constitutive neuronal expression and disease-associated upregulation of chitinas [PMID:41762671] | Gaur N, Angerer C, Gunes ZI, Ancau M, Wa | Brain | 2026 | 0 |
| Interaction of mtROS-Immune-Inflammatory Vicious Cycle Activation in Sepsis-Indu [PMID:41905969] | Wang Y, Yuan Q | Clin Exp Pharmacol Physiol | 2026 | 0 |
| Plasma CHI3L1 as a marker of cognitive and structural brain changes in radiologi [PMID:41953284] | Schneider R, Brand-Arzamendi K, Lim TR, | BMJ Neurol Open | 2026 | 0 |
| Metformin attenuates HSV-1-induced neuropathic pain by restoring Sirt3-mediated [PMID:41896899] | Yuanyuan Fang; Mengqiu Deng; Kesheng Hua | Cell communication and signali | 2026 | 0 |
| Hydrogen-Enriched Hyaluronic Acid Dressing Ameliorates Diabetic Foot Ulcer via P [PMID:41906653] | Xu Z, Cui X, Chu H, Wan H, Xie Y, Wang Y | Journal of diabetes | 2026 | 0 |
| Inhibition of mitochondrial ROS turns LC3-associated phagocytosis to autophagy u [PMID:41896101] | Cheng YL, Su MS, Liao CC, Chang TW, Hsie | Journal of microbiology, immun | 2026 | 0 |
| Hyperoside stabilizes ACAT1 to promote fatty acid oxidation and attenuate kidney [PMID:41903436] | Shan C, Szili-Torok T, Yue G, Zhang L, M | Phytomedicine : international | 2026 | 0 |
Multi-agent debates referencing this entity
closed · Rounds: 4 · Score: 0.50 · 2026-04-20
closed · Rounds: 4 · Score: 0.50 · 2026-04-20
Hypotheses and analyses mentioning ARK in their description or question text
Score: 0.755 · molecular biology · 2026-04-21
**Molecular Mechanism and Rationale** The p16^INK4a-CCF axis represents a sophisticated temporal biomarker system that
Score: 0.738 · Alzheimer's Disease · 2026-04-02
## Mechanistic Overview SIRT3-Mediated Mitochondrial Deacetylation Failure with PINK1/Parkin Mitophagy Dysfunction start
Score: 0.735 · Alzheimer's disease · 2026-04-04
## Mechanistic Overview Stage-Specific TREM2 Biomarker-Guided Switching — Agonist in Amyloid Phase, Antagonist in Tau Ph
Score: 0.714 · biomarkers · 2026-04-22
## Mechanistic Overview CSF YKL-40 as a Priming-Specific Chitinase Marker starts from the claim that modulating CHI3L1/Y
Score: 0.707 · translational neuroscience · 2026-04-16
## Mechanistic Overview Creatine Kinase System Capacity as Neural Energy Reserve Biomarker starts from the claim that mo
Score: 0.705 · unknown disease · 2026-04-26
Aquaporin-4 (AQP4) water channels are normally concentrated at astrocyte end-feet ensheathing cerebral microvessels. Ear
Score: 0.700 · neurodegeneration · 2026-04-25
Therapeutic benefit from pericyte-directed senescence interventions depends on stage. If BBB leak and dysfunction occur
Score: 0.699 · neuroscience · 2026-04-26
FRAP-based measurement of TDP-43 liquid-liquid phase separation state provides a continuous biomarker of nuclear-cytopla
Score: 0.682 · molecular biology · 2026-04-21
## Mechanistic Overview mTORC1 Reactivation as Autophagy-Senescence Divergence Point Marker starts from the claim that m
Score: 0.677 · translational neuroscience · 2026-04-16
## Mechanistic Overview Dynamic Lactate-Pyruvate Ratio as Therapeutic Stratification Biomarker starts from the claim tha
Score: 0.670 · neurodegeneration · 2026-04-21
## Mechanistic Overview OPTN/TBK1 mutations create selective vulnerability by blocking PINK1-Parkin-independent mitophag
Score: 0.662 · unknown disease · 2026-04-26
CSF soluble PDGFR-β shedding from pericytes as the earliest detectable molecular event in AD, preceding amyloid/tau path
Score: 0.642 · neurodegeneration · 2026-04-20
**Molecular Mechanism and Rationale** The TREM2 (Triggering Receptor Expressed on Myeloid cells 2) pathway represents a
Score: 0.640 · unknown disease · 2026-04-26
Endothelial cells shed microvesicles (EMVs) during activation or injury. EMVs from degenerating brain endothelium carry
Score: 0.620 · neuroscience · 2026-04-26
VPS26/VPS29/VPS35 retromer complex maintains axonal endosomal signaling microdomains controlling TrkB/p75NTR trafficking