mechanism 2,062 words KG: ent-gene-173851ef
Contents

Ribonuclease κ and Circular RNAs: A New Mechanism of Aging and Neurodegeneration

🔬 Protein Info
Gene Symbolent-gene-173851ef
BacksplicingThe 5' end of an exon connects to the 3' end of the same or a different exon
Covalent closureForms a stable covalently closed circular molecule
No cap/tailProduces circular molecules lacking 5' caps and 3' tails
CDR1as (ciRS-7)Contains 74 miR-7 binding sites, acts as an effective miR-7 sponge[@piwecka2017]
Sry circRNAContains 16 miR-135 binding sites[@hansen2013a]
circHIPK3Sponges multiple miRNAs including miR-124
RNA binding protein (RBP) sequestrationBind and sequester RBPs
Transcription factor interferenceTrap transcription factors
Splicing factor modulationAffect spliceosome function
Internal ribosome entry sites (IRES)Enable cap-independent translation
circRNA-encoded peptidesProduce novel protein isoforms
Disease associationTranslation products linked to disease states[@pamudurti2017]
RNA polymerase II regulationModulate transcriptional activity
Epigenetic modificationsAffect chromatin modifications
Parent gene expressionRegulate expression of host genes
KG Connections2 knowledge graph edges
DatabasesGeneCardsUniProtNCBI GeneHPASTRING

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Related Hypotheses (140)

Circadian-Synchronized Proteostasis Enhancement
Score: 0.74
Smartphone-Detected Motor Variability Correction
Score: 0.74
Senescent Cell Mitochondrial DNA Release
Score: 0.74
Near-infrared light therapy stimulates COX4-dependent mitoch
Score: 0.74
Epigenetic Memory Erasure via TET2 Activation
Score: 0.74
PARP1 Inhibition Therapy
Score: 0.74
Aquaporin-4 Polarization Rescue
Score: 0.73
Senescence-Associated Myelin Lipid Remodeling
Score: 0.73
Senescence-Induced Lipid Peroxidation Spreading
Score: 0.73
Adenosine-Astrocyte Metabolic Reset
Score: 0.73
Phase-Separated Organelle Targeting
Score: 0.73
Synthetic Biology BBB Endothelial Cell Reprogramming
Score: 0.73
Metabolic Switch Targeting for A1→A2 Repolarization
Score: 0.73
TFAM overexpression creates mitochondrial donor-recipient gr
Score: 0.73
Astrocyte-Mediated Neuronal Epigenetic Rescue
Score: 0.73
Interfacial Lipid Mimetics to Disrupt Domain Interaction
Score: 0.72
Circadian Rhythm Entrainment of Reactive Astrocytes
Score: 0.72
Sleep Spindle-Synaptic Plasticity Enhancement
Score: 0.72
Astroglial Gap Junction Coordination via Connexin-43 Phospho
Score: 0.72
Stress Granule Phase Separation Modulators
Score: 0.72
← Prevpg 2/7Next →

Related Analyses (30)

SEA-AD Gene Expression Profiling — Allen Brain Cell Atlas
neurodegeneration · completed
Selective vulnerability of entorhinal cortex layer II neuron
neurodegeneration · archived
4R-tau strain-specific spreading patterns in PSP vs CBD
neurodegeneration · archived
TDP-43 phase separation therapeutics for ALS-FTD
neurodegeneration · archived
Astrocyte reactivity subtypes in neurodegeneration
neurodegeneration · archived

Related Experiments (30)

ER-Golgi Secretory Pathway Dysfunction in PD - Experiment De
clinical · proposed · Score: 0.40
s:** - Biochemical binding assays measuring PROTAC selectivi
falsification · proposed · Score: 0.40
Proposed experiment from debate on Epigenetic clocks and bio
falsification · proposed · Score: 0.40
Proposed experiment from debate on Microglia activate astroc
falsification · proposed · Score: 0.40
Proposed experiment from debate on Astrocytes adopt A1 (neur
falsification · completed · Score: 0.40

See Also (15)

Metabolomic Biomarkers in Neurodegeneration
biomarker · Pages share 139 hypotheses
Adrenal Chromaffin Cells in Neurodegeneration
cell · Pages share 139 hypotheses
MDS 2026 — Fluid Biomarker Advances in Neurodegeneratio
event · Pages share 139 hypotheses
Blood-Based Biomarkers for Neurodegeneration
biomarker · Pages share 139 hypotheses
Neuroimaging Biomarkers for Neurodegeneration
biomarker · Pages share 139 hypotheses

Knowledge Graph (2 edges)

ent-gene-173851ef data_in benchmark_ot_ad_answer_key:RNASEK
benchmark_ot_ad_answer_key:RNASEK data_in ent-gene-173851ef

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