entity

protective chromatin remodeling

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about protective chromatin remodeling: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

2Connections
2Hypotheses
2Analyses
0Outgoing
2Incoming
0Experiments
6Debates

No AI portrait yet

Outgoing (0)

TargetRelationTypeStr
No outgoing edges

Incoming (2)

SourceRelationTypeStr
h-gap-456a357b-m3involveshypothesis0.70
h-gap-e7852b55-m3involveshypothesis0.70

Targeting Hypotheses (2)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
protective chromatin remodeling defines the therapeutic wind 0.723 neurodegeneration Are DNA methylation changes in neurodege
protective chromatin remodeling defines the therapeutic wind 0.723 neurodegeneration Are age-related DNA methylation changes

Mentioning Analyses (2)

Scientific analyses that reference this entity

Are age-related DNA methylation changes protective adaptations or pathological d

neurodegeneration | 2026-04-26 | 3 hypotheses Top: 0.750

Are DNA methylation changes in neurodegeneration causal drivers or protective co

neurodegeneration | 2026-04-26 | 3 hypotheses Top: 0.750

Experiments (0)

Experimental studies targeting or related to this entity

ExperimentTypeDiseaseScoreFeasibilityModelStatusEst. Cost
No experiments found

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
TDP-43 Triggers Mitochondrial DNA Release via mPTP to Activate cGAS/STING in ALS [PMID:33031745] Yu CH, Davidson S, Harapas CR, Hilton JB Cell 2020 2
PARP1-DNA co-condensation drives DNA repair site assembly to prevent disjunction [PMID:38320550] Chappidi, Quail, Doll, Vogel, Aleksandro Cell 2024 0
DNA-Origami-Armored DNA Condensates. [PMID:39075031] Yamashita, Sato, Suzuki, Ishikawa, Takin Chembiochem : a European journ 2024 0
PARP1-DNA co-condensation drives DNA repair site assembly to prevent disjunction [PMID:38320550] Unknown Cell 2024 0
DNA-Origami-Armored DNA Condensates. [PMID:39075031] Unknown Chembiochem : a European journ 2024 0
Regulation of Human DNA Primase-Polymerase PrimPol. [PMID:37758313] Boldinova, Makarova Biochemistry. Biokhimiia 2023 0
Global identification of SWI/SNF targets reveals compensation by EP400. [PMID:37922899] Martin BJE, Ablondi EF, Goglia C Cell 2023 0
Regulation of Human DNA Primase-Polymerase PrimPol. [PMID:37758313] Unknown Biochemistry. Biokhimiia 2023 0
Bone remodeling: an operational process ensuring survival and bone mechanical co [PMID:35851054] Bolamperti S, Villa I, Rubinacci A Bone Res 2022 0
WDR45 contributes to neurodegeneration through regulation of ER homeostasis and [PMID:31204559] ["Wan Huida", "Wang Qi", "Chen Xiuting", Autophagy 2020 0
Mammalian SWI/SNF Chromatin Remodeling Complexes: Emerging Mechanisms and Therap [PMID:32873422] Centore RC, Sandoval GJ, Soares LMM Trends Genet 2020 0
TDP-43 Triggers Mitochondrial DNA Release via mPTP to Activate cGAS/STING in ALS [PMID:33031745] Yu CH, Davidson S, Harapas CR, Hilton JB Cell 2020 0
WDR45 contributes to neurodegeneration through regulation of ER homeostasis and [PMID:31204559] ["Wan Huida", "Wang Qi", "Chen Xiuting", Autophagy 2020 0
Homologous recombination and the repair of DNA double-strand breaks. [PMID:29599286] Wright, Shah, Heyer The Journal of biological chem 2019 0
Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-de [PMID:30643298] Melamed Z, López-Erauskin J, Baughn MW, Nature neuroscience 2019 0
Homologous recombination and the repair of DNA double-strand breaks. [PMID:29599286] Unknown The Journal of biological chem 2019 0
Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-de [PMID:30643298] Melamed Z, López-Erauskin J, Baughn MW, Nature neuroscience 2019 0
DNA Damage, Neurodegeneration, and Synaptic Plasticity. [PMID:27313899] Merlo, Cuchillo-Ibañez, Parlato, Ra Neural plasticity 2018 0
Immunometabolic Pathways in BCG-Induced Trained Immunity. [PMID:27926861] Arts RJW, Carvalho A, La Rocca C Cell Rep 2016 0
DNA Damage, Neurodegeneration, and Synaptic Plasticity. [PMID:27313899] Unknown Neural Plast 2016 0

Debates (6)

Multi-agent debates referencing this entity

Formal debate: age-linked CpG drift is the actionable driver in: Are DNA methyla

active · Rounds: 3 · Score: 0.75 · 2026-04-26

Formal debate: ATAC-seq accessibility separates causal from compensatory states

active · Rounds: 3 · Score: 0.75 · 2026-04-26

Formal debate: age-linked CpG drift is the actionable driver in: Are age-related

active · Rounds: 3 · Score: 0.75 · 2026-04-26

Formal debate: ATAC-seq accessibility separates causal from compensatory states

active · Rounds: 3 · Score: 0.75 · 2026-04-26

Are age-related DNA methylation changes protective adaptations or pathological d

closed · Rounds: 4 · Score: 0.78 · 2026-04-26

Are DNA methylation changes in neurodegeneration causal drivers or protective co

closed · Rounds: 4 · Score: 0.78 · 2026-04-26

Related Research

Hypotheses and analyses mentioning protective chromatin remodeling in their description or question text

No additional research found