[Atlas] Expand knowledge graph — add edges from PubMed abstracts for top entities done

Use NLP/LLM extraction to add KG edges from paper abstracts. Focus on top 50 entities by connection count. Target: 2000+ new edges with evidence.

Completion Notes

Auto-completed by supervisor after successful deploy to main

Git Commits (2)

Squash merge: orchestra/task/61fa12c3-expand-knowledge-graph-add-edges-from-pu (2 commits)2026-04-25

[Atlas] Extract 646 new KG edges from paper abstracts via co-occurrence NLP [task:61fa12c3-df56-43ce-870c-9243943d3778]2026-04-02

Sibling Tasks in Quest (Atlas) ↗

○[Atlas] Squad findings bubble-up driver (driver #20)P94

○[Atlas] Install Dolt server + migrate first dataset (driver #26)P92

○[Atlas] Dataset PR review & merge driver (driver #27)P92

○[Atlas] Wiki mermaid LLM regen — 50 pages/run, parallel agentsP92

○[Atlas] Gap closure pipeline — match 500 open gaps to accumulated evidence and resolveP92

○[Atlas] CI: Drive artifact folder migration backfillP92

○[Atlas] Versioned tabular datasets — overall coordination questP90

○[Atlas] KG ↔ dataset cross-link driver (driver #30)P90

○[Atlas] CI: Generate semantic metadata for unsummarized artifactsP90

○[Atlas] PubMed evidence update pipelineP87