Protein expression analysis and cell migration assays in cardiac fibroblasts

Exploratory Score: 0.880 Price: $0.50 cardiac fibrosis primary cardiac fibroblasts from R26-LSL-TFEB+/+; Acta2-cre and R26-LSL-TFEB+/+ mice Status: proposed

What This Experiment Tests

Exploratory experiment designed to discover new patterns targeting TFEB, Thbs1 in primary cardiac fibroblasts from R26-LSL-TFEB+/+; Acta2-cre and R26-LSL-TFEB+/+ mice. Primary outcome: protein expression levels and cell migration capacity

Description

Cardiac fibroblasts were extracted from adult R26-LSL-TFEB+/+; Acta2-cre and control R26-LSL-TFEB+/+ mice to examine the effects of TFEB overexpression on protein expression and cellular behavior. Western blot analysis was performed to detect protein levels of integrin, CD47, CD36, Thbs1, p-paxillin, vinculin, P-FAK, and α-SMA. Cell migration capacity was assessed using wound healing and Transwell migration assays. The results showed elevated Thbs1 protein levels in TFEB-overexpressing cardiac fibroblasts, along with modulation of focal adhesion complex proteins including reduced activation of p-paxillin, vinculin, and P-FAK. These changes were associated with altered cellular adhesion dynamics and migration properties of cardiac fibroblasts.

TARGET GENE
TFEB, Thbs1
MODEL SYSTEM
primary cardiac fibroblasts from R26-LSL-TFEB+/+; Acta2-cre and R26-LSL-TFEB+/+ mice
ESTIMATED COST
$0
TIMELINE
0 months
PATHWAY
focal adhesion signaling, ECM receptor interaction
SOURCE
extracted_from_pmid_41935359
PRIMARY OUTCOME
protein expression levels and cell migration capacity

Scoring Dimensions

Info Gain 0.00 (25%) Feasibility 0.00 (20%) Hyp Coverage 0.00 (20%) Cost Effect. 0.00 (15%) Novelty 0.00 (10%) Ethical Safety 0.00 (10%) 0.880 composite

📖 Wiki Pages

TFEB-Mediated Lysosomal BiogenesismechanismTFEB Activators for Parkinson's DiseasemechanismTFEB (Redirect)redirectTFEB Activator Therapies for Neurodegenerative DistherapeuticTFEBgenetfeb-activators-neurodegenerationtherapeuticTFEB Protein (Transcription Factor EB)proteinTFEB ProteinproteinCD47-SIRPα Immune Checkpoint TherapytherapeuticTFEB Activators in NeurodegenerationtherapeuticTFEB Signaling in Neurodegenerationmechanismcd36geneCD47 GenegeneTFEB Autophagy PathwaymechanismCD36 Protein (Cluster of Differentiation 36)protein

Protocol

Cardiac fibroblast isolation, Western blot analysis for multiple proteins, wound healing assay, Transwell migration assay

Expected Outcomes

TFEB overexpression would modulate focal adhesion proteins and reduce fibroblast migration

Success Criteria

Significant changes in protein expression and migration capacity between TFEB overexpressing and control cells

Related Hypotheses (4)

Cell-Type Specific TFEB Modulation0.677
The Mitochondrial-Lysosomal Metabolic Coupling Dysfunction0.652
TFEB-PGC1α Mitochondrial-Lysosomal Decoupling0.622
Temporal TFEB Modulation Therapy0.609

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