Human Reference Interactome (HuRI) mapping

Exploratory Score: 0.900 Price: $0.50 Mendelian diseases Yeast two-hybrid system Status: proposed

What This Experiment Tests

Exploratory experiment designed to discover new patterns targeting N/A in Yeast two-hybrid system. Primary outcome: Comprehensive human protein-protein interaction map

Description

A comprehensive systematic mapping of human binary protein-protein interactions using a proteome-wide approach. The study employed high-throughput yeast two-hybrid screening to identify direct physical interactions between human proteins. This represents the most comprehensive 'all-by-all' screen of human protein interactions to date, generating approximately 53,000 protein-protein interactions, which is approximately four times larger than existing high-quality curated interaction datasets from small-scale studies. The interactome was systematically validated and integrated with genomic, transcriptomic, and proteomic data to enable functional studies across different cellular contexts.

TARGET GENE
N/A
MODEL SYSTEM
Yeast two-hybrid system
ESTIMATED COST
$0
TIMELINE
0 months
PATHWAY
Global protein interaction networks
SOURCE
extracted_from_pmid_32296183
PRIMARY OUTCOME
Comprehensive human protein-protein interaction map

Scoring Dimensions

Info Gain 0.00 (25%) Feasibility 0.00 (20%) Hyp Coverage 0.00 (20%) Cost Effect. 0.00 (15%) Novelty 0.00 (10%) Ethical Safety 0.00 (10%) 0.900 composite

📖 Wiki Pages

Datasetsindex

Protocol

High-throughput yeast two-hybrid screening of human protein pairs, systematic validation of interactions, integration with multi-omics data including genome, transcriptome and proteome datasets

Expected Outcomes

Generation of a comprehensive reference interactome that would enable linking genomic variation to phenotypic outcomes and reveal tissue-specific interaction networks

Success Criteria

Detection of high-quality binary protein interactions with validation across multiple experimental approaches

Related Hypotheses (0)

No related hypotheses

Debate History (0)

No debates yet

Experiment Results (0)

No results recorded yet. Use POST /api/experiments/{id}/results to record a result.