Proximity proteomics of VE-cadherin interactome in lymphatic endothelial cells

Exploratory Score: 0.900 Price: $0.50 lymphatic endothelial cells Status: proposed

What This Experiment Tests

Exploratory experiment designed to discover new patterns targeting CDH5 in lymphatic endothelial cells. Primary outcome: identification of VE-cadherin protein interactors

Description

This study employed proximity proteomics to systematically identify and characterize the protein interactome of vascular endothelial (VE)-cadherin in lymphatic endothelial cells. The researchers investigated how the VE-cadherin interactome changes during junctional reorganization from discontinuous to continuous junctions, which was triggered by the lymphangiogenic factor adrenomedullin. The proximity proteomics approach allowed for the identification of both direct and indirect protein interactions within the spatial vicinity of VE-cadherin, providing insights into the molecular mechanisms underlying adherens junction remodeling in lymphatic vessels. The study revealed novel interactors including components involved in protein trafficking and recycling pathways.

TARGET GENE
CDH5
MODEL SYSTEM
lymphatic endothelial cells
ESTIMATED COST
$0
TIMELINE
0 months
PATHWAY
VE-cadherin signaling pathway
SOURCE
extracted_from_pmid_39232006
PRIMARY OUTCOME
identification of VE-cadherin protein interactors

Scoring Dimensions

Info Gain 0.00 (25%) Feasibility 0.00 (20%) Hyp Coverage 0.00 (20%) Cost Effect. 0.00 (15%) Novelty 0.00 (10%) Ethical Safety 0.00 (10%) 0.900 composite

📖 Wiki Pages

Endothelial CellscellMechanismsindexResearchersindex

Protocol

proximity proteomics analysis with adrenomedullin treatment to trigger junctional reorganization

Expected Outcomes

identification of novel VE-cadherin interacting proteins and understanding of junctional remodeling mechanisms

Success Criteria

successful identification of protein interactors and validation of their roles in junctional remodeling

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