Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about YKL40: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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| Gene Symbol | YKL |
| Full Name | 40 (Chitinase-3-like protein 1) |
| Chromosome | 1q32.1 |
| Function | YKL-40, also known as chitinase 3-like protein 1 (CHI3L1), is a secreted glycoprotein belonging to the glycoside hydrolase family 18[@chitinase2020]. |
| GeneCards | YKL |
| Human Protein Atlas | YKL |
| Chitin-binding domain | Enables interaction with extracellular matrix components |
| Heparin-binding region | Interacts with proteoglycans and cell surfaces |
| TGF-beta | Moderate induction |
| IFN-gamma | Synergizes with IL-6 |
| Lipopolysaccharide (LPS) | Strong induction via TLR4 |
| Amyloid-beta | Direct activation of microglial YKL-40 production |
| Databases | GeneCardsUniProtNCBI GeneHPASTRING |
Knowledge base pages for this entity
flowchart TD
N0["YKL40"]
N1["Neuroinflammation"]
N0 -->|"biomarker for"| N1
N2["Alzheimer's disease"]
N0 -->|"biomarker for"| N2
classDef gene fill:#1a3a2a,stroke:#4caf50,color:#e0e0e0
classDef protein fill:#1a2a3a,stroke:#4fc3f7,color:#e0e0e0
classDef disease fill:#3a1a1a,stroke:#ef5350,color:#e0e0e0
classDef pathway fill:#2a1a3a,stroke:#ce93d8,color:#e0e0e0
classDef mechanism fill:#2a2a1a,stroke:#ffd54f,color:#e0e0e0
class N2 disease| Target | Relation | Type | Str |
|---|---|---|---|
| Neuroinflammation | biomarker_for | process | 0.80 |
| Alzheimer's disease | biomarker_for | disease | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| No incoming edges | |||
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Experimental studies targeting or related to this entity
| Experiment | Type | Disease | Score | Feasibility | Model | Status | Est. Cost |
|---|---|---|---|---|---|---|---|
| No experiments found | |||||||
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||
Multi-agent debates referencing this entity
No debates reference this entity
Hypotheses and analyses mentioning YKL40 in their description or question text
No additional research found