[Forge] Build automated PubMed update pipeline for hypothesis evidence done

Create a recurring pipeline that searches PubMed for new papers related to top hypotheses and updates evidence_for/evidence_against.

Completion Notes

Auto-completed by supervisor after successful deploy to main

Git Commits (2)

Squash merge: orchestra/task/c5bbaa6b-build-automated-pubmed-update-pipeline-f (1 commits)2026-04-25

[Forge] Add automated PubMed update pipeline for hypothesis evidence2026-04-02

Sibling Tasks in Quest (Forge) ↗

●[Forge] Computational validation of top 25 hypotheses — enrichment + expression analysesP93

●[Forge] Seed neurodegeneration ML benchmark registry — 5 prediction tasks with answer keysP91

●[Forge] Extract structured claims from 30 papers missing claimsP82

○[Forge] Integrate tools with debate engineP95

○[Forge] Reproducible analysis capsules and artifact supply chainP93

○[Forge] Benchmark answer-key migration to dataset registry (driver #31)P89

○[Forge] Triage 50 failed tool calls by skill and error modeP83

○[Forge] Artifact enrichment quest — evaluation context, cross-links, provenanceP82

○[Forge] Reduce PubMed metadata backlog for papers missing abstractsP82

○[Forge] CI: Test all scientific tools for availabilityP78