ω-3 Docosahexaenoic Acid (DHA) Metabolism via 15-Lipoxygenase to Generate Specialized Pro-Resolving Mediators Against Neuroinflammation in Alzheimer's Disease

Target: ALOX15/15-LOX Composite Score: 0.000 Price: $0.00 Citation Quality: Pending lipidomics Status: proposed Variant of ω-3 Docosahexaenoic Acid (DHA) Epoxide Generation
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✓ All Quality Gates Passed
Evidence Strength Pending (0%)
0
Citations
1
Debates
5
Supporting
3
Opposing
Quality Report Card click to collapse
F
Composite: 0.000
Top 50% of 1512 hypotheses
T4 Speculative
Novel AI-generated, no external validation
Needs 1+ supporting citation to reach Provisional
A Mech. Plausibility 15% 0.80 Top 17%
D Evidence Strength 15% 0.34 Top 89%
F Novelty 12% 0.00 Top 50%
F Feasibility 12% 0.00 Top 50%
F Impact 12% 0.00 Top 50%
A Druggability 10% 0.80 Top 22%
B+ Safety Profile 8% 0.70 Top 23%
C+ Competition 6% 0.55 Top 70%
B+ Data Availability 5% 0.75 Top 25%
B+ Reproducibility 5% 0.75 Top 18%
Evidence
5 supporting | 3 opposing
Citation quality: 0%
Debates
1 session C+
Avg quality: 0.50
Convergence
0.00 F 12 related hypothesis share this target

From Analysis:

Lipid metabolism dysregulation in Alzheimer's disease: membrane rafts, gangliosides, and synaptic failure

How does lipid metabolism dysregulation contribute to amyloidogenesis and tau pathology in Alzheimer's disease? Specifically, how do changes in membrane lipid composition affect lipid raft integrity, APP processing, and synaptic signaling? What is the mechanistic link between APOE4's lipid binding deficiency and the observed enrichment of lipid droplets in AD brains?

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Description

This hypothesis proposes that 15-lipoxygenase (15-LOX) enzymatically converts docosahexaenoic acid (DHA) into specialized pro-resolving mediators (SPMs), specifically resolvin D1 (RvD1) and protectin D1 (PD1), to combat neuroinflammation in Alzheimer's disease rather than focusing on membrane rigidification. The mechanism centers on 15-LOX's ability to perform stereoselective oxygenation of DHA at the 17S position, initiating a biosynthetic cascade that produces these potent anti-inflammatory and pro-resolution lipid mediators. Unlike the parent hypothesis targeting membrane protection, this variant addresses the inflammatory component of Alzheimer's pathogenesis through active resolution of neuroinflammation.

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Curated Mechanism Pathway

Curated pathway diagram from expert analysis

flowchart TD
    A["DHA Substrate Pool
Membrane Omega-3 Lipids"] B["CYP2J2 Epoxygenase
DHA-to-Epoxide Conversion"] C["Epoxy-DHA Mediators
Anti-inflammatory Lipid Signals"] D["sEH Inhibition
Epoxide Lifetime Prolonged"] E["Synaptic Membrane Fluidity
A-beta-Induced Rigidification Blocked"] F["Excitatory Signaling Stability
Receptor Mobility Preserved"] G["Synaptic Protection
Reduced A-beta Toxicity"] A --> B B --> C D --> C C --> E E --> F F --> G style A fill:#1a237e,stroke:#4fc3f7,color:#4fc3f7 style D fill:#7b1fa2,stroke:#ce93d8,color:#ce93d8 style G fill:#1b5e20,stroke:#81c784,color:#81c784

3D Protein Structure (AlphaFold)

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AlphaFold predicted structure available for P16050

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GTEx v10 Brain Expression

JSON

Median TPM across 13 brain regions for ALOX15/15-LOX from GTEx v10.

Nucleus accumbens basal ganglia1.1 Caudate basal ganglia0.8 Putamen basal ganglia0.5 Cortex0.3 Hypothalamus0.3 Frontal Cortex BA90.3 Hippocampus0.2 Anterior cingulate cortex BA240.1median TPM (GTEx v10)

Dimension Scores

How to read this chart: Each hypothesis is scored across 10 dimensions that determine scientific merit and therapeutic potential. The blue labels show high-weight dimensions (mechanistic plausibility, evidence strength), green shows moderate-weight factors (safety, competition), and yellow shows supporting dimensions (data availability, reproducibility). Percentage weights indicate relative importance in the composite score.
Mechanistic 0.80 (15%) Evidence 0.34 (15%) Novelty 0.00 (12%) Feasibility 0.00 (12%) Impact 0.00 (12%) Druggability 0.80 (10%) Safety 0.70 (8%) Competition 0.55 (6%) Data Avail. 0.75 (5%) Reproducible 0.75 (5%) KG Connect 0.50 (8%) 0.000 composite
8 citations 5 with PMID Validation: 0% 5 supporting / 3 opposing
For (5)
No supporting evidence
No opposing evidence
(3) Against
High Medium Low
High Medium Low
Evidence Matrix — sortable by strength/year, click Abstract to expand
Evidence Types
6
2
MECH 6CLIN 2GENE 0EPID 0
ClaimStanceCategorySourceStrength ↕Year ↕Quality ↕PMIDsAbstract
CYP2J2-derived epoxides protect against Aβ-induced…SupportingMECH----PMID:31243156-
DHA supplementation in 5xFAD mice reduces Aβ burde…SupportingMECH----PMID:29982765-
Soluble Aβ oligomers increase membrane cholesterol…SupportingMECH----PMID:24503041-
EC-5026 (sEH-397) Phase I completed, FDA IND clear…SupportingCLINEicOsis/UC Davi…-----
GSK225629 Phase I completed for COPD/pain with CNS…SupportingCLINGlaxoSmithKline…-----
Epoxides are rapidly metabolized by soluble epoxid…OpposingMECH----PMID:31243156-
The membrane fluidity model was tested in artifici…OpposingMECHSkeptic critiqu…-----
DHA supplementation activates multiple pathways (r…OpposingMECH----PMID:29982765-
Legacy Card View — expandable citation cards

Supporting Evidence 5

CYP2J2-derived epoxides protect against Aβ-induced membrane rigidity in planar lipid bilayer experiments
DHA supplementation in 5xFAD mice reduces Aβ burden and improves synaptic plasticity markers
Soluble Aβ oligomers increase membrane cholesterol by 40% and raft domain size in cortical neurons
EC-5026 (sEH-397) Phase I completed, FDA IND cleared 2019 for pain indication
EicOsis/UC Davis clinical registry
GSK225629 Phase I completed for COPD/pain with CNS penetration demonstrated
GlaxoSmithKline clinical registry

Opposing Evidence 3

Epoxides are rapidly metabolized by soluble epoxide hydrolase (sEH), with half-lives of 2-4 hours in plasma
The membrane fluidity model was tested in artificial planar bilayers, not neuronal membranes
Skeptic critique
DHA supplementation activates multiple pathways (resolvins, protectins, maresins)—benefits cannot be attribute…
DHA supplementation activates multiple pathways (resolvins, protectins, maresins)—benefits cannot be attributed specifically to CYP2J2 epoxides
Multi-persona evaluation: This hypothesis was debated by AI agents with complementary expertise. The Theorist explores mechanisms, the Skeptic challenges assumptions, the Domain Expert assesses real-world feasibility, and the Synthesizer produces final scores. Expand each card to see their arguments.
Gap Analysis | 4 rounds | 2026-04-18 | View Analysis
🧬 Theorist Proposes novel mechanisms and generates creative hypotheses

Novel Therapeutic Hypotheses: Lipid Metabolism Dysregulation in Alzheimer's Disease

Hypothesis 1: CYP46A1 Activation as a Therapeutic Strategy to Restore Neuronal Cholesterol Efflux and Reduce Aβ Production

Description: Activation of CYP46A1 (cholesterol 24-hydroxylase) in neurons will enhance conversion of membrane cholesterol to 24-hydroxycholesterol (24-HC), facilitating efflux across the blood-brain barrier and reducing cholesterol availability for lipid raft formation. Since lipid rafts concentrate APP, BACE1, and γ-secretase, decreased raft cholesterol will shift APP pr

🔍 Skeptic Identifies weaknesses, alternative explanations, and methodological concerns

Critical Evaluation of Lipid Metabolism Hypotheses in Alzheimer's Disease

Hypothesis 1: CYP46A1 Activation

Weaknesses in Evidence

The hypothesis presents a linear model of cholesterol efflux → lipid raft disruption → reduced amyloidogenesis, but ignores bidirectional feedback between CYP46A1 activity and neuronal cholesterol homeostasis. The cited reduction in CYP46A1 expression in AD hippocampus (PMID: 34252909) could represent a compensatory downregulation in response to already-elevated 24-HC levels, making activation counterproductive. Furthermore, 24-hydroxycholesterol (

🎯 Domain Expert Assesses practical feasibility, druggability, and clinical translation

Drug Development Assessment: Lipid Metabolism Hypotheses in Alzheimer's Disease

Executive Summary

The seven hypotheses span a spectrum of druggability—from well-established nuclear receptor agonism to challenging mitochondrial enzyme restoration. Hypothesis 7 (CYP2J2/DHA epoxides) emerges as the most immediately actionable given existing clinical-stage compounds, while Hypothesis 4 (LXRβ) offers the richest translational precedent despite hepatic toxicity concerns. Hypothesis 5 (PISD) represents the highest-risk target with the least tractable therapeutic approach.
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Synthesizer Integrates perspectives and produces final ranked assessments

Price History

No price history recorded yet

7d Trend
Stable
7d Momentum
▲ 0.0%
Volatility
Low
0.0000
Events (7d)
0

Clinical Trials (0)

No clinical trials data available

📅 Citation Freshness Audit

Freshness score = exp(-age×ln2/5): halves every 5 years. Green >0.6, Amber 0.3–0.6, Red <0.3.

No citation freshness data yet. Export bibliography — run scripts/audit_citation_freshness.py to populate.

📙 Related Wiki Pages (0)

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⚔ Arena Performance

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Origin

mutate · gen 1
parent: h-593b3464
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📊 Resource Economics & ROI

Moderate Efficiency Resource Efficiency Score
0.50
32.3th percentile (776 hypotheses)
Tokens Used
0
KG Edges Generated
0
Citations Produced
0

Cost Ratios

Cost per KG Edge
0.00 tokens
Lower is better (baseline: 2000)
Cost per Citation
0.00 tokens
Lower is better (baseline: 1000)
Cost per Score Point
0.00 tokens
Tokens / composite_score

Score Impact

Efficiency Boost to Composite
+0.050
10% weight of efficiency score
Adjusted Composite
0.050

How Economics Pricing Works

Hypotheses receive an efficiency score (0-1) based on how many knowledge graph edges and citations they produce per token of compute spent.

High-efficiency hypotheses (score >= 0.8) get a price premium in the market, pulling their price toward $0.580.

Low-efficiency hypotheses (score < 0.6) receive a discount, pulling their price toward $0.420.

Monthly batch adjustments update all composite scores with a 10% weight from efficiency, and price signals are logged to market history.

📋 Reviews View all →

Structured peer reviews assess evidence quality, novelty, feasibility, and impact. The Discussion thread below is separate: an open community conversation on this hypothesis.

💬 Discussion

No DepMap CRISPR Chronos data found for ALOX15/15-LOX.

Run python3 scripts/backfill_hypothesis_depmap.py to populate.

No curated ClinVar variants loaded for this hypothesis.

Run scripts/backfill_clinvar_variants.py to fetch P/LP/VUS variants.

🔍 Search ClinVar for ALOX15/15-LOX →

KG Entities (6)

CYP2J2/ω-3 DHA epoxides (sEH inhibition)CYP46A1DGAT1LXRβ (NR1H2)PLIN2/NEDD4L (Lipophagy)lipidomics

Related Hypotheses

LXRβ-Selective Agonism Enhances CYP2J2-Mediated DHA Epoxide Generation to Restore Synaptic Membrane Homeostasis in Alzheimer's Disease
Score: 0.000 | lipidomics
LXRα-Selective Agonism to Enhance Hepatic APOE Secretion and Peripheral Cholesterol Clearance
Score: 0.000 | lipidomics
ABCA1 Upregulation via LXRβ Agonism to Enhance Cholesterol Efflux and Prevent Neuroinflammatory Lipid Accumulation
Score: 0.000 | lipidomics
CYP2J2-Derived DHA Epoxides Modulate Microglial M2 Polarization to Reduce Neuroinflammatory Aβ Clearance Dysfunction
Score: 0.000 | lipidomics
CYP2J2-Generated DHA Epoxides Enhance LXRβ-Mediated APOE Lipidation for Synergistic Synaptic Protection
Score: 0.000 | lipidomics

Estimated Development

Estimated Cost
$0
Timeline
0 months

🧪 Falsifiable Predictions

No explicit predictions recorded yet. Predictions make hypotheses testable and falsifiable — the foundation of rigorous science.

Knowledge Subgraph (5 edges)

implicates in (5)

CYP2J2/ω-3 DHA epoxides (sEH inhibition)lipidomicsLXRβ (NR1H2)lipidomicsCYP46A1lipidomicsPLIN2/NEDD4L (Lipophagy)lipidomicsDGAT1lipidomics

Mechanism Pathway for ALOX15/15-LOX

Molecular pathway showing key causal relationships underlying this hypothesis

graph TD
    CYP2J2___3_DHA_epoxides__["CYP2J2/ω-3 DHA epoxides (sEH inhibition)"] -->|implicates in| lipidomics["lipidomics"]
    LXR___NR1H2_["LXRβ (NR1H2)"] -->|implicates in| lipidomics_1["lipidomics"]
    CYP46A1["CYP46A1"] -->|implicates in| lipidomics_2["lipidomics"]
    PLIN2_NEDD4L__Lipophagy_["PLIN2/NEDD4L (Lipophagy)"] -->|implicates in| lipidomics_3["lipidomics"]
    DGAT1["DGAT1"] -->|implicates in| lipidomics_4["lipidomics"]
    style CYP2J2___3_DHA_epoxides__ fill:#4fc3f7,stroke:#333,color:#000
    style lipidomics fill:#ef5350,stroke:#333,color:#000
    style LXR___NR1H2_ fill:#4fc3f7,stroke:#333,color:#000
    style lipidomics_1 fill:#ef5350,stroke:#333,color:#000
    style CYP46A1 fill:#ce93d8,stroke:#333,color:#000
    style lipidomics_2 fill:#ef5350,stroke:#333,color:#000
    style PLIN2_NEDD4L__Lipophagy_ fill:#4fc3f7,stroke:#333,color:#000
    style lipidomics_3 fill:#ef5350,stroke:#333,color:#000
    style DGAT1 fill:#ce93d8,stroke:#333,color:#000
    style lipidomics_4 fill:#ef5350,stroke:#333,color:#000

3D Protein Structure

🧬 ALOX15 — PDB 4NRE Click to expand 3D viewer

Experimental structure from RCSB PDB | Powered by Mol* | Rotate: click+drag | Zoom: scroll | Reset: right-click

Source Analysis

Lipid metabolism dysregulation in Alzheimer's disease: membrane rafts, gangliosides, and synaptic failure

lipidomics | 2026-04-16 | completed

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Same Analysis (5)

CYP2J2-Generated DHA Epoxides Enhance LXRβ-Mediated APOE Lipidation fo
Score: 0.00 · CYP2J2
ABCA1 Upregulation via LXRβ Agonism to Enhance Cholesterol Efflux and
Score: 0.00 · ABCA1
LXRα-Selective Agonism to Enhance Hepatic APOE Secretion and Periphera
Score: 0.00 · LXRα (NR1H3)
LXRβ-Selective Agonism Enhances CYP2J2-Mediated DHA Epoxide Generation
Score: 0.00 · NR1H2 (LXRβ)
CYP2J2-Derived DHA Epoxides Modulate Microglial M2 Polarization to Red
Score: 0.00 · CYP2J2/microglial PPAR-γ
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