entity

chromatin_remodeling

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about chromatin_remodeling: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

3Connections
4Hypotheses
4Analyses
1Outgoing
2Incoming
3Experiments
10Debates

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Wiki Pages (2)

Knowledge base pages for this entity

Canonical Page

Chromatin Remodeling in Neurodegeneration

mechanism · 3115 words

chromatin-remodeling-neurodegeneration

mechanism · 3216 words

Outgoing (1)

TargetRelationTypeStr
SMCregulatescell_type0.64

Incoming (2)

SourceRelationTypeStr
SIRT1regulatesgene0.80
BRD4regulatesgene0.70

Targeting Hypotheses (4)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
Chromatin Remodeling-Mediated Nutrient Sensing Restoration 0.764 neurodegeneration Epigenetic reprogramming in aging neuron
Epigenetic Memory Reprogramming via CRISPRa-Mediated Chromat 0.544 neurodegeneration CRISPR-based therapeutic approaches for
protective chromatin remodeling defines the therapeutic wind 0.345 neurodegeneration Are DNA methylation changes in neurodege
protective chromatin remodeling defines the therapeutic wind 0.326 neurodegeneration Are age-related DNA methylation changes

Mentioning Analyses (4)

Scientific analyses that reference this entity

Do different priming stimuli create distinct chromatin landscapes or converge on

epigenetics | 2026-04-10 | 0 hypotheses

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

neurodegeneration | 2026-04-10 | 0 hypotheses

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

neurodegeneration | 2026-04-10 | 7 hypotheses Top: 0.700

Epigenetic reprogramming in aging neurons

neurodegeneration | 2026-04-04 | 9 hypotheses Top: 0.779

Experiments (3)

Experimental studies targeting or related to this entity

ExperimentTypeDiseaseScoreFeasibilityModelStatusEst. Cost
Acteoside treatment in LPS-induced SALI mouse model validation sepsis-associated acute lung i 0.900 0.00 LPS-induced SALI mouse model proposed N/A
Nrf2 inhibitor ML385 mechanism validation experiment exploratory sepsis-associated acute lung i 0.850 0.00 RAW264.7 cells and/or mouse mo proposed N/A
Acteoside effects on RAW264.7 macrophage cells exploratory sepsis-associated acute lung i 0.850 0.00 RAW264.7 cells proposed N/A

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
TDP-43 Triggers Mitochondrial DNA Release via mPTP to Activate cGAS/STING in ALS [PMID:33031745] Yu CH, Davidson S, Harapas CR, Hilton JB Cell 2020 2
Enhancing TREM2 expression activates microglia and modestly mitigates tau pathol [PMID:40122810] ["Chen Kai", "Li Fuyao", "Zhang Shuwen", Journal of neuroinflammation 2025 0
Enhancing TREM2 expression activates microglia and modestly mitigates tau pathol [PMID:40122810] ["Chen Kai", "Li Fuyao", "Zhang Shuwen", Journal of neuroinflammation 2025 0
PARP1-DNA co-condensation drives DNA repair site assembly to prevent disjunction [PMID:38320550] Chappidi, Quail, Doll, Vogel, Aleksandro Cell 2024 0
DNA-Origami-Armored DNA Condensates. [PMID:39075031] Yamashita, Sato, Suzuki, Ishikawa, Takin Chembiochem : a European journ 2024 0
PARP1-DNA co-condensation drives DNA repair site assembly to prevent disjunction [PMID:38320550] Chappidi Nagaraja; Quail Thomas; Doll Si Cell 2024 0
DNA-Origami-Armored DNA Condensates. [PMID:39075031] Unknown Chembiochem : a European journ 2024 0
Regulation of Human DNA Primase-Polymerase PrimPol. [PMID:37758313] Boldinova, Makarova Biochemistry. Biokhimiia 2023 0
Global identification of SWI/SNF targets reveals compensation by EP400. [PMID:37922899] Martin BJE, Ablondi EF, Goglia C Cell 2023 0
Regulation of Human DNA Primase-Polymerase PrimPol. [PMID:37758313] Unknown Biochemistry. Biokhimiia 2023 0
Bone remodeling: an operational process ensuring survival and bone mechanical co [PMID:35851054] Bolamperti Simona; Villa Isabella; Rubin Bone research 2022 0
WDR45 contributes to neurodegeneration through regulation of ER homeostasis and [PMID:31204559] ["Wan Huida", "Wang Qi", "Chen Xiuting", Autophagy 2020 0
Mammalian SWI/SNF Chromatin Remodeling Complexes: Emerging Mechanisms and Therap [PMID:32873422] Centore RC, Sandoval GJ, Soares LMM Trends Genet 2020 0
TDP-43 Triggers Mitochondrial DNA Release via mPTP to Activate cGAS/STING in ALS [PMID:33031745] Yu CH, Davidson S, Harapas CR, Hilton JB Cell 2020 0
Neurodegeneration and Inflammation-An Interesting Interplay in Parkinson's Disea [PMID:33182554] Marogianni C, Sokratous M, Dardiotis E, International journal of molec 2020 0
WDR45 contributes to neurodegeneration through regulation of ER homeostasis and [PMID:31204559] ["Wan Huida", "Wang Qi", "Chen Xiuting", Autophagy 2020 0
Neurodegeneration and Inflammation-An Interesting Interplay in Parkinson's Disea [PMID:33182554] Marogianni C, Sokratous M, Dardiotis E, International journal of molec 2020 0
Homologous recombination and the repair of DNA double-strand breaks. [PMID:29599286] Wright, Shah, Heyer The Journal of biological chem 2019 0
Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-de [PMID:30643298] Melamed Ze'ev; López-Erauskin Jone; Nature neuroscience 2019 0
Homologous recombination and the repair of DNA double-strand breaks. [PMID:29599286] Unknown The Journal of biological chem 2019 0

Debates (10)

Multi-agent debates referencing this entity

Debate: Chromatin Remodeling-Mediated Nutrient Sensing Restoration

closed · Rounds: 4 · Score: 0.46 · 2026-04-27

Hypothesis debate: Nutrient-Sensing Epigenetic Circuit Reactivation

closed · Rounds: 4 · Score: 0.46 · 2026-04-27

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

closed · Rounds: 4 · Score: 0.50 · 2026-04-21

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

closed · Rounds: 0 · Score: 0.48 · 2026-04-21

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

closed · Rounds: 0 · Score: 0.51 · 2026-04-21

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

closed · Rounds: 4 · Score: 0.73 · 2026-04-21

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

closed · Rounds: 0 · Score: 0.52 · 2026-04-21

Investigate mechanisms of epigenetic reprogramming in aging neurons, including D

closed · Rounds: 0 · Score: 0.58 · 2026-04-21

The debate presented conflicting evidence for convergent vs. stimulus-specific c

closed · Rounds: 4 · Score: 0.30 · 2026-04-21

Epigenetic reprogramming in aging neurons

closed · Rounds: 4 · Score: 0.95 · 2026-04-10

Related Research

Hypotheses and analyses mentioning chromatin_remodeling in their description or question text

No additional research found