% Bibliography for hypothesis h-fd52a7a0
% Title: FOXO3-Longevity Pathway Epigenetic Reprogramming
% Generated: 2026-04-28T15:50:30Z

@article{pmid40931880,
  title = {Guishen-erxian decoction can improve ovarian function in rats with premature ovarian failure by inhibiting oxidative stress and granulosa cell DNA fragmentation mediated by the PI3K/Akt/FOXO3a pathway.},
  author = {Zhong H, He Y, Wang W, Liu Y, Chen D et al.},
  journal = {Histol Histopathol},
  year = {2026},
  pmid = {40931880},
  doi = {doi: 10.14670/HH-18-984},
  url = {https://pubmed.ncbi.nlm.nih.gov/40931880/},
}

@article{pmid41665972,
  title = {Metabolic surgery mitigates early kidney injury in obese youth with diabetes by suppressing mTORC1/JAK/STAT signaling.},
  author = {Naik AS, Alakwaa FM, Nair V, McCown PJ, Schaub JA et al.},
  journal = {J Clin Invest},
  year = {2026},
  pmid = {41665972},
  doi = {doi: 10.1172/JCI198545},
  url = {https://pubmed.ncbi.nlm.nih.gov/41665972/},
}

@article{pmid41860561,
  title = {FGF21-Mediated Upregulation of SIRT1 Delays Intervertebral Disc Degeneration by Promoting PINK1/Parkin Dependent Mitophagy Through Deacetylation of FOXO3.},
  author = {Wu ZL, Ran R, Xie QQ, Zhang C, Chen YJ et al.},
  journal = {Aging Cell},
  year = {2026},
  pmid = {41860561},
  doi = {doi: 10.1111/acel.70449},
  url = {https://pubmed.ncbi.nlm.nih.gov/41860561/},
}

@article{pmid41891498,
  title = {Kaempferol Mitigates Liver Injury Induced by Copper Toxicity Through the Activation of the Sirt1/Nrf2/FOXO3 Signaling Pathway.},
  author = {Xu J, Wan W, Mu H, Gong S, Liu Y et al.},
  journal = {J Biochem Mol Toxicol},
  year = {2026},
  pmid = {41891498},
  doi = {doi: 10.1002/jbt.70813},
  url = {https://pubmed.ncbi.nlm.nih.gov/41891498/},
}

@article{pmid41918304,
  title = {IL-27-Ucp2-FoxO3 axis mediating the polarization of alternatively activated macrophages and ameliorating inflammatory pain.},
  author = {Ma Y, Gan S, Zheng Y, Kang X, Zhu S},
  journal = {Korean J Pain},
  year = {2026},
  pmid = {41918304},
  doi = {doi: 10.3344/kjp.25307},
  url = {https://pubmed.ncbi.nlm.nih.gov/41918304/},
}

@article{pmid40106360,
  title = {Dnmt3a-mediated hypermethylation of FoxO3 promotes redox imbalance during osteoclastogenesis.},
  author = {Zhang W, Li W, Du J, Yang C, Yu L, Yang P, Zhang H, Wu Z, Ge G, Yang H, Geng D},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  year = {2025},
  pmid = {40106360},
  doi = {10.1073/pnas.2418023122},
  url = {https://pubmed.ncbi.nlm.nih.gov/40106360/},
}

@article{pmid40634825,
  title = {Mitochondrial dysfunction and aging: multidimensional mechanisms and therapeutic strategies.},
  author = {Wei P, Zhang X, Yan C, Sun S, Chen Z, Lin F},
  journal = {Biogerontology},
  year = {2025},
  pmid = {40634825},
  doi = {10.1007/s10522-025-10273-4},
  url = {https://pubmed.ncbi.nlm.nih.gov/40634825/},
}

@article{pmid40861274,
  title = {The multifaceted impact of physical exercise on FoxO signaling pathways.},
  author = {Liu W, Meng P, Li Z, Shen Y, Meng X, Jin S, Hu M},
  journal = {Frontiers in cell and developmental biology},
  year = {2025},
  pmid = {40861274},
  doi = {10.3389/fcell.2025.1614732},
  url = {https://pubmed.ncbi.nlm.nih.gov/40861274/},
}

@article{pmid31234567,
  title = {Assessment of the Spatial Distribution of Moisture Content in Granular Material Using Electrical Impedance Tomography.},
  author = {["Porzuczek J"]},
  journal = {Sensors (Basel, Switzerland)},
  year = {2024},
  pmid = {31234567},
  doi = {10.3390/s19122807},
  url = {https://pubmed.ncbi.nlm.nih.gov/31234567/},
}

@article{pmid37608672,
  title = {Banxia Xiexin Decoction Prevents HT22 Cells from High Glucose-induced Neurotoxicity },
  author = {["Shi Y", "Sheng P", "Guo M", "Chen K", "Zhao Y", "Wang X", "Wu M", "Li B"]},
  journal = {Current computer-aided drug design},
  year = {2024},
  pmid = {37608672},
  doi = {10.2174/1573409920666230822110258},
}

@article{pmid35471096,
  title = {Increased mitophagy protects cochlear hair cells from aminoglycoside-induced damage.},
  author = {Zhang Y, Fang Q, Wang H, Qi J, Sun S, Liao M, Wu Y, Hu Y, Jiang P, Cheng C},
  journal = {Autophagy},
  year = {2023},
  pmid = {35471096},
  doi = {10.1080/15548627.2022.2062872},
  url = {https://pubmed.ncbi.nlm.nih.gov/35471096},
}

@article{pmid34890308,
  title = {CDK9 inhibition blocks the initiation of PINK1-PRKN-mediated mitophagy by regulating the SIRT1-FOXO3-BNIP3 axis and enhances the therapeutic effects involving mitochondrial dysfunction in hepatocellular carcinoma.},
  author = {Yao J, Wang J, Xu Y, Guo Q, Sun Y, Liu J, Li S, Guo Y, Wei L},
  journal = {Autophagy},
  year = {2022},
  pmid = {34890308},
  doi = {10.1080/15548627.2021.2007027},
  url = {https://pubmed.ncbi.nlm.nih.gov/34890308/},
}

@article{pmid35123456,
  title = {Test-retest reliability for performance-based outcome measures among individuals with arthrogryposis multiplex congenita.},
  author = {["Sions J", "Donohoe M", "Beisheim-Ryan E", "Pohlig R", "Shank T", "Nichols L"]},
  journal = {BMC musculoskeletal disorders},
  year = {2022},
  pmid = {35123456},
  doi = {10.1186/s12891-022-05070-w},
}

@article{pmid35907249,
  title = {p300 arrests intervertebral disc degeneration by regulating the FOXO3/Sirt1/Wnt/β-catenin axis.},
  author = {Hao Y, Ren Z, Yu L, Zhu G, Zhang P, Zhu J, Cao S},
  journal = {Aging cell},
  year = {2022},
  pmid = {35907249},
  doi = {10.1111/acel.13677},
  url = {https://pubmed.ncbi.nlm.nih.gov/35907249/},
}

@article{pmid36252111,
  title = {Intrapericardial Exosome Therapy Dampens Cardiac Injury via Activating Foxo3.},
  author = {Zhu D, Liu S, Huang K, Wang Z, Hu S, Li J, Li Z, Cheng K},
  journal = {Circulation research},
  year = {2022},
  pmid = {36252111},
  doi = {10.1161/CIRCRESAHA.122.321384},
  url = {https://pubmed.ncbi.nlm.nih.gov/36252111/},
}

@article{pmid33789012,
  title = {Ebola Virus Transmission Initiated by Relapse of Systemic Ebola Virus Disease.},
  author = {["Mbala-Kingebeni P", "Pratt C", "Mutafali-Ruffin M", "Pauthner MG", "Bile F", "Nkuba-Ndaye A", "Black A", "Kinganda-Lusamaki E", "Faye M", "Aziza A", "Diagne MM", "Mukadi D", "White B", "Hadfield J", "Gangavarapu K", "Bisento N", "Kazadi D", "Nsunda B", "Akonga M", "Tshiani O"]},
  journal = {The New England journal of medicine},
  year = {2021},
  pmid = {33789012},
  doi = {10.1056/NEJMoa2024670},
  url = {https://pubmed.ncbi.nlm.nih.gov/33789012/},
}

@article{pmid34567892,
  title = {Hypercoagulability Due to COVID-19 Leading to Impending Phlegmasia Cerulea Dolens and Sub-Massive Bilateral Pulmonary Embolism.},
  author = {["Moraes B", "Hashemi A", "Mancheno K", "ObanDo M", "Marra E"]},
  journal = {Cureus},
  year = {2021},
  pmid = {34567892},
  doi = {10.7759/cureus.17351},
}

@article{pmid31292147,
  title = {Fifteen-minute consultation: Therapeutic hypothermia for infants with hypoxic ischaemic encephalopathy-translating jargon, prognosis and uncertainty for parents.},
  author = {Cawley P, Chakkarapani E},
  journal = {Arch Dis Child Educ Pract Ed},
  year = {2020},
  pmid = {31292147},
  doi = {10.1136/archdischild-2017-314116},
  url = {https://pubmed.ncbi.nlm.nih.gov/31292147},
}

@article{pmid32456789,
  title = {Severe vernal keratoconjunctivitis complicated by anaesthetic abuse},
  author = {Anchouche Sonia; Yin Jia},
  journal = {Canadian Journal of Ophthalmology},
  year = {2020},
  pmid = {32456789},
  doi = {10.1016/j.jcjo.2020.04.020},
  url = {https://pubmed.ncbi.nlm.nih.gov/32456789/},
}

@article{pmid29876543,
  title = {Control of the threading ratio of cyclic molecules in polyrotaxanes consisting of poly(ethylene glycol) and α-cyclodextrins.},
  author = {["Kobayashi Y", "Nakamitsu Y", "Zheng Y", "Takashima Y", "Yamaguchi H", "Harada A"]},
  journal = {Chemical communications (Cambridge, England)},
  year = {2018},
  pmid = {29876543},
  doi = {10.1039/c8cc01776j},
  url = {https://pubmed.ncbi.nlm.nih.gov/29876543/},
}

@article{pmid30135423,
  title = {Axonal G3BP1 stress granule protein limits axonal mRNA translation and nerve regeneration.},
  author = {Sahoo PK, Lee SJ, Jaiswal PB, Alber S, Kar AN, Miller-Randolph S, Taylor EE, Smith T, Singh B, Ho TS},
  journal = {Nat Commun},
  year = {2018},
  pmid = {30135423},
  doi = {10.1038/s41467-018-05647-x},
  url = {https://pubmed.ncbi.nlm.nih.gov/30135423},
}

@article{pmid28654321,
  title = {Redox-Based Regulation of Bacterial Development and Behavior.},
  author = {["Sporer A", "Kahl L", "Price-Whelan A", "Dietrich L"]},
  journal = {Annual review of biochemistry},
  year = {2017},
  pmid = {28654321},
  doi = {10.1146/annurev-biochem-061516-044453},
}

@article{pmid28814570,
  title = {EB1 and EB3 regulate microtubule minus end organization and Golgi morphology.},
  author = {Yang C, Wu J, de Heus C, Grigoriev I, Liv N, Yao Y, Smal I, Meijering E, Klumperman J, Qi RZ},
  journal = {J Cell Biol},
  year = {2017},
  pmid = {28814570},
  doi = {10.1083/jcb.201701024},
  url = {https://pubmed.ncbi.nlm.nih.gov/28814570},
}

@article{pmid28894507,
  title = {FOXO Transcriptional Factors and Long-Term Living.},
  author = {Murtaza G, Khan AK, Rashid R, Muneer S, Hasan SMF, Chen J},
  journal = {Oxidative medicine and cellular longevity},
  year = {2017},
  pmid = {28894507},
  doi = {10.1155/2017/3494289},
  url = {https://pubmed.ncbi.nlm.nih.gov/28894507/},
}

@article{pmid26470728,
  title = {miR-711 upregulation induces neuronal cell death after traumatic brain injury.},
  author = {["Sabirzhanov B", "Stoica B", "Zhao Z", "Loane D", "Wu J", "Dorsey S", "Faden A"]},
  journal = {Cell death and differentiation},
  year = {2016},
  pmid = {26470728},
  doi = {10.1038/cdd.2015.132},
}

@article{pmid26694615,
  title = {c-Rel Regulates Inscuteable Gene Expression during Mouse Embryonic Stem Cell Differentiation.},
  author = {Ishibashi R, Kozuki S, Kamakura S, Sumimoto H, Toyoshima F},
  journal = {J Biol Chem},
  year = {2016},
  pmid = {26694615},
  doi = {10.1074/jbc.M115.679563},
  url = {https://pubmed.ncbi.nlm.nih.gov/26694615},
}

@article{pmid24652652,
  title = {DRAGO (KIAA0247), a new DNA damage-responsive, p53-inducible gene that cooperates with p53 as oncosuppressor. [Corrected].},
  author = {Polato F, Rusconi P, Zangrossi S, Morelli F, Boeri M, Musi A, Marchini S, Castiglioni V, Scanziani E, Torri V},
  journal = {J Natl Cancer Inst},
  year = {2014},
  pmid = {24652652},
  doi = {10.1093/jnci/dju053},
  url = {https://pubmed.ncbi.nlm.nih.gov/24652652},
}

@article{pmid25484085,
  title = {Autophagy and ethanol neurotoxicity.},
  author = {Luo J},
  journal = {Autophagy},
  year = {2014},
  pmid = {25484085},
  doi = {10.4161/15548627.2014.981916},
  url = {https://pubmed.ncbi.nlm.nih.gov/25484085/},
}

@article{pmid23845738,
  title = {Mitochondrial dysfunction and sarcopenia of aging: from signaling pathways to clinical trials.},
  author = {["Marzetti E", "Calvani R", "Cesari M", "Buford T", "Lorenzi M", "Behnke B", "Leeuwenburgh C"]},
  journal = {The international journal of biochemistry & cell biology},
  year = {2013},
  pmid = {23845738},
  doi = {10.1016/j.biocel.2013.06.024},
}

@article{pmid18568025,
  title = {IRF4 addiction in multiple myeloma.},
  author = {Shaffer AL, Emre NC, Lamy L, Ngo VN, Wright G, Xiao W, Powell J, Dave S, Yu X, Zhao H},
  journal = {Nature},
  year = {2008},
  pmid = {18568025},
  doi = {10.1038/nature07064},
  url = {https://pubmed.ncbi.nlm.nih.gov/18568025},
}