% Bibliography for hypothesis h-b7898b79
% Title: Circadian Clock-Autophagy Synchronization
% Generated: 2026-04-27T15:27:14Z

@article{pmid41665740,
  title = {Randomized controlled trial of resistance exercise and brain aging clocks.},
  author = {["Gonzalez-Gomez R", "Demnitz N", "Coronel C", "Gates A", "Kjaer M", "Siebner H", "Boraxbekk C", "Ibanez A"]},
  journal = {GeroScience},
  year = {2026},
  pmid = {41665740},
  doi = {10.1007/s11357-026-02141-x},
}

@article{pmid41785851,
  title = {Restoring circadian rhythms in the hypothalamic paraventricular nucleus reverses aging biomarkers and extends lifespan in male mice.},
  author = {Zhao H, Liao M, Huo R, He T, Tian H et al.},
  journal = {Cell},
  year = {2026},
  pmid = {41785851},
  doi = {doi: 10.1016/j.cell.2026.01.016},
  url = {https://pubmed.ncbi.nlm.nih.gov/41785851/},
}

@article{pmid41809128,
  title = {Emerging role of epigenetic mechanisms in glaucoma and their translational potential.},
  author = {Kondkar AA, Sultan T, Azad TA, Al-Obeidan SA},
  journal = {Frontiers in genetics},
  year = {2026},
  pmid = {41809128},
  doi = {10.3389/fgene.2026.1781271},
  url = {https://pubmed.ncbi.nlm.nih.gov/41809128/},
}

@article{pmid41833042,
  title = {Precision Neurodegeneration: Integrating Molecular Mechanisms, Biomarkers, and Targeted Therapeutics.},
  author = {["Lyu G", "Li D"]},
  journal = {CNS & neurological disorders drug targets},
  year = {2026},
  pmid = {41833042},
  doi = {10.2174/0118715273435428251202075956},
}

@article{pmid41845938,
  title = {Unveiling the 12-Hour Ultradian Rhythm: Biological Foundations, Mechanistic Insights, and Potential Applications.},
  author = {Song J, Wang C, Li H, Wang T, Jiao X},
  journal = {Cell biochemistry and function},
  year = {2026},
  pmid = {41845938},
  doi = {10.1002/cbf.70195},
  url = {https://pubmed.ncbi.nlm.nih.gov/41845938/},
}

@article{pmid41886887,
  title = {Epigenetics and the gut-brain axis: Insights into DNA methylation, aging, and Alzheimer disease.},
  author = {Kumar V, Shukla R, Gangani S, Joseph R, Jain S, Yadav H},
  journal = {The Journal of pharmacology and experimental therapeutics},
  year = {2026},
  pmid = {41886887},
  doi = {10.1016/j.jpet.2026.104299},
  url = {https://pubmed.ncbi.nlm.nih.gov/41886887/},
}

@article{pmid41913359,
  title = {Circadian abnormalities, molecular clock gene and chronobiological treatment for psychiatric disorders.},
  author = {Chakraborty S, Srivastava V},
  journal = {Chronobiology international},
  year = {2026},
  pmid = {41913359},
  doi = {10.1080/07420528.2026.2648750},
  url = {https://pubmed.ncbi.nlm.nih.gov/41913359/},
}

@article{pmid41914045,
  title = {Circadian synchronization between diet and gut microbiota in modulating host's health.},
  author = {["Ma J", "Zhen Y", "Weng Y", "Lin J", "Zhang C", "Zhong Y", "Zhou J", "Wang M"]},
  journal = {Gut microbes},
  year = {2026},
  pmid = {41914045},
  doi = {10.1080/19490976.2026.2647602},
}

@article{pmid41914253,
  title = {Astrocytes in the Circadian System: A Promising Target for Mood Disorder Interventions.},
  author = {["Liu P", "Li H", "Zhu Y", "Song S", "Kang L", "Hu Y"]},
  journal = {Journal of integrative neuroscience},
  year = {2026},
  pmid = {41914253},
  doi = {10.31083/JIN48501},
}

@article{pmid41915304,
  title = {Hydrogen as a Potential Modulator: Implications for Mast Cell-Sleep-Wake Rhythm-Melatonin Interactions in Sleep Disorders.},
  author = {Cui C, Tang W, Guo Y, Shi J, Gao Y, Chen H, Wei Y},
  journal = {Molecular neurobiology},
  year = {2026},
  pmid = {41915304},
  doi = {10.1007/s12035-026-05824-w},
  url = {https://pubmed.ncbi.nlm.nih.gov/41915304/},
}

@article{pmid41917546,
  title = {CsPRR7 negatively regulates cold tolerance by repressing CsCBF3 in tea plants.},
  author = {Wang J, Zhang Y, Wu Y, Di T, Xu M, Dong Y, Liu E, Peng J, Li N, Hao X, Wang X, Wang L},
  journal = {Plant cell reports},
  year = {2026},
  pmid = {41917546},
  doi = {10.1007/s00299-026-03797-7},
  url = {https://pubmed.ncbi.nlm.nih.gov/41917546/},
}

@article{pmid41921644,
  title = {Differences in epigenetic age acceleration according to a diagnosis of endometriosis/adenomyosis: the Norwegian Mother, Father and Child Cohort Study.},
  author = {["Magnus M", "Sk\u00e5ra K", "Hanevik H", "Rytter D", "Danielsson K", "Sharp G", "Missmer S", "Lee Y"]},
  journal = {American journal of obstetrics and gynecology},
  year = {2026},
  pmid = {41921644},
  doi = {10.1016/j.ajog.2026.03.022},
}

@article{pmid41922126,
  title = {The neuroprotective role of eugenol against glyphosate-induced toxicity in rats: Modulation of oxidative stress, inflammation, ER stress and apoptotic signaling pathways.},
  author = {Bolat İ, Alat Ö, Orhan B, Dereli E, Tekin S, Laçin BB, Bolat M, Kapakin KAT, Sağlam YS},
  journal = {Tissue & cell},
  year = {2026},
  pmid = {41922126},
  doi = {10.1016/j.tice.2026.103509},
  url = {https://pubmed.ncbi.nlm.nih.gov/41922126/},
}

@article{pmid41922265,
  title = {Roles of Temperature and Reactive Oxygen Species in Circadian Rhythms and Thermosensitivity.},
  author = {Miyake T},
  journal = {Biological & pharmaceutical bulletin},
  year = {2026},
  pmid = {41922265},
  doi = {10.1248/bpb.b25-00811},
  url = {https://pubmed.ncbi.nlm.nih.gov/41922265/},
}

@article{pmid41922784,
  title = {Author Correction: CLOCK and BMAL1 stabilize and activate RHOA to promote F-actin formation in cancer cells.},
  author = {Ma Teng-Jiao; Zhang Zhi-Wei; Lu Yi-Lu; Zhang Ying-Ying; Tao Da-Chang; Liu Yun-Qiang; Ma Yong-Xin},
  journal = {Experimental & molecular medicine},
  year = {2026},
  pmid = {41922784},
  doi = {10.1038/s12276-026-01722-2},
  url = {https://pubmed.ncbi.nlm.nih.gov/41922784/},
}

@article{pmid41923233,
  title = {Effects of circadian rhythms on antimicrobial peptide concentrations in lactating goat milk.},
  author = {Liang ZL, Nii T, Sugino T, Isobe N},
  journal = {BMC veterinary research},
  year = {2026},
  pmid = {41923233},
  doi = {10.1186/s12917-026-05444-5},
  url = {https://pubmed.ncbi.nlm.nih.gov/41923233/},
}

@article{pmid41923888,
  title = {EpigeneticAgePipeline: An R Package for Comprehensive Assessment of Epigenetic Age Metrics From Methylation Microarrays.},
  author = {["Rayevskiy S", "Le Q", "Nguyen J", "Chen S", "Castellani C"]},
  journal = {Bioinformatics and biology insights},
  year = {2026},
  pmid = {41923888},
  doi = {10.1177/11779322261433665},
}

@article{pmid41924832,
  title = {Clocks out of sync: Increased epigenetic aging variability in multiple sclerosis.},
  author = {["Schumacher F", "Cutter G", "Burd C", "Archer K", "Zhang Y"]},
  journal = {Journal of the neurological sciences},
  year = {2026},
  pmid = {41924832},
  doi = {10.1016/j.jns.2026.125904},
}

@article{pmid41925987,
  title = {Striatal Dysregulation of Angpt2 and Circadian Gene Expression in a Rotenone Rat Model of Parkinson's Disease.},
  author = {Al Saeedy DY, Hawkins E, Dozmorov MG, Tripathi O, Mahdiani S et al.},
  journal = {J Mol Neurosci},
  year = {2026},
  pmid = {41925987},
  doi = {doi: 10.1007/s12031-026-02506-z},
  url = {https://pubmed.ncbi.nlm.nih.gov/41925987/},
}

@article{pmid41926119,
  title = {Prolonged Dual Hypothermic Oxygenated Machine Perfusion for Daytime Liver Transplant.},
  author = {Bodewes SB, Woltjes LC, Thorne AM, Eden J, Lantinga VA, Lascaris B, Blokzijl H, Fouraschen SMG, Hartog H, Vos JJ, Lisman T, de Meijer VE, DHOPE-PRO Investigators},
  journal = {JAMA network open},
  year = {2026},
  pmid = {41926119},
  doi = {10.1001/jamanetworkopen.2026.5039},
  url = {https://pubmed.ncbi.nlm.nih.gov/41926119/},
}

@article{pmid41927992,
  title = {Dialling up the circadian clock to target ageing},
  author = {Villanueva M Teresa},
  journal = {Nature Reviews Drug Discovery},
  year = {2026},
  pmid = {41927992},
  doi = {10.1038/d41573-026-00057-x},
  url = {https://pubmed.ncbi.nlm.nih.gov/41927992/},
}

@article{pmid41933172,
  title = {The exposome of brain aging across 34 countries.},
  author = {Legaz A, Moguilner S, Barttfeld P, Cuadros Castro J, Galván Rial DS et al.},
  journal = {Nat Med},
  year = {2026},
  pmid = {41933172},
  doi = {doi: 10.1038/s41591-026-04302-z},
  url = {https://pubmed.ncbi.nlm.nih.gov/41933172/},
}

@article{pmid33177107,
  title = {Improved T-cell Receptor Diversity Estimates Associate with Survival and Response to Anti-PD-1 Therapy.},
  author = {Bortone DS, Woodcock MG, Parker JS, Vincent BG},
  journal = {Cancer Immunol Res},
  year = {2021},
  pmid = {33177107},
  doi = {10.1158/2326-6066.CIR-20-0398},
  url = {https://pubmed.ncbi.nlm.nih.gov/33177107},
}

@article{pmid28671696,
  title = {Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.},
  author = {Li J, Zhang W, Yang H, Howrigan DP, Wilkinson B, Souaiaia T, Evgrafov OV, Genovese G, Clementel VA, Tudor JC},
  journal = {Nat Neurosci},
  year = {2017},
  pmid = {28671696},
  doi = {10.1038/nn.4594},
  url = {https://pubmed.ncbi.nlm.nih.gov/28671696},
}

@article{pmid27702874,
  title = {Core Concept: The Internet of Things and the explosion of interconnectivity.},
  author = {Ornes S},
  journal = {Proc Natl Acad Sci U S A},
  year = {2016},
  pmid = {27702874},
  doi = {10.1073/pnas.1613921113},
  url = {https://pubmed.ncbi.nlm.nih.gov/27702874},
}